Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MT-ND1P03886 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.1■□□□□ 0.33
MT-ND1P03886 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.1■□□□□ 0.33
MT-ND1P03886 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.1■□□□□ 0.33
MT-ND1P03886 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-ND1P03886 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.1■□□□□ 0.33
MT-ND1P03886 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MT-ND1P03886 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-ND1P03886 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
MT-ND1P03886 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-ND1P03886 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
MT-ND1P03886 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 AC004951.3-201ENST00000418645 1148 ntBASIC17.1■□□□□ 0.33
MT-ND1P03886 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 RPPH1-201ENST00000516869 333 ntBASIC17.1■□□□□ 0.33
MT-ND1P03886 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.1■□□□□ 0.33
MT-ND1P03886 AP001094.4-201ENST00000579008 2176 ntBASIC17.1■□□□□ 0.33
MT-ND1P03886 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
MT-ND1P03886 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.1■□□□□ 0.33
MT-ND1P03886 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.1■□□□□ 0.33
MT-ND1P03886 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MT-ND1P03886 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.1■□□□□ 0.33
MT-ND1P03886 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.09■□□□□ 0.33
MT-ND1P03886 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MT-ND1P03886 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
MT-ND1P03886 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.09■□□□□ 0.33
MT-ND1P03886 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
MT-ND1P03886 KRT18P41-201ENST00000518924 1277 ntBASIC17.09■□□□□ 0.33
MT-ND1P03886 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.09■□□□□ 0.33
MT-ND1P03886 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.09■□□□□ 0.33
MT-ND1P03886 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.09■□□□□ 0.33
MT-ND1P03886 AC026271.3-201ENST00000571884 352 ntBASIC17.09■□□□□ 0.33
MT-ND1P03886 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
MT-ND1P03886 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.09■□□□□ 0.33
MT-ND1P03886 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.09■□□□□ 0.33
MT-ND1P03886 AL031985.4-201ENST00000642138 673 ntBASIC17.09■□□□□ 0.33
MT-ND1P03886 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.09■□□□□ 0.33
MT-ND1P03886 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.09■□□□□ 0.33
MT-ND1P03886 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.09■□□□□ 0.33
MT-ND1P03886 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
MT-ND1P03886 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.09■□□□□ 0.33
MT-ND1P03886 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.09■□□□□ 0.33
MT-ND1P03886 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
MT-ND1P03886 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
MT-ND1P03886 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MT-ND1P03886 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MT-ND1P03886 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MT-ND1P03886 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.33
MT-ND1P03886 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MT-ND1P03886 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.08■□□□□ 0.33
MT-ND1P03886 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MT-ND1P03886 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MT-ND1P03886 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms