Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SPCS2P1-201ENST00000561636 679 ntBASIC19.47■□□□□ 0.71
TIMP1P01033 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.47■□□□□ 0.71
TIMP1P01033 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.47■□□□□ 0.71
TIMP1P01033 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TIMP1P01033 AC010460.3-201ENST00000511359 1579 ntBASIC19.47■□□□□ 0.71
TIMP1P01033 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.47■□□□□ 0.71
TIMP1P01033 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TIMP1P01033 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TIMP1P01033 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TIMP1P01033 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP1P01033 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP1P01033 AL161938.1-201ENST00000569833 2180 ntBASIC19.46■□□□□ 0.71
TIMP1P01033 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.46■□□□□ 0.71
TIMP1P01033 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP1P01033 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TIMP1P01033 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.46■□□□□ 0.71
TIMP1P01033 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP1P01033 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.46■□□□□ 0.71
TIMP1P01033 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP1P01033 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP1P01033 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP1P01033 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.46■□□□□ 0.71
TIMP1P01033 AC103564.2-201ENST00000432853 1299 ntBASIC19.46■□□□□ 0.71
TIMP1P01033 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TIMP1P01033 IGHV3-65-201ENST00000523210 341 ntBASIC19.46■□□□□ 0.71
TIMP1P01033 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.46■□□□□ 0.71
TIMP1P01033 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.46■□□□□ 0.71
TIMP1P01033 AC073592.5-201ENST00000624854 528 ntBASIC19.46■□□□□ 0.71
TIMP1P01033 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP1P01033 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP1P01033 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP1P01033 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP1P01033 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.46■□□□□ 0.71
TIMP1P01033 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP1P01033 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP1P01033 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TIMP1P01033 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
TIMP1P01033 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP1P01033 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP1P01033 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TIMP1P01033 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TIMP1P01033 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP1P01033 PCDHAC2-203ENST00000615316 3011 ntBASIC19.45■□□□□ 0.7
TIMP1P01033 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TIMP1P01033 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TIMP1P01033 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP1P01033 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP1P01033 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.45■□□□□ 0.7
TIMP1P01033 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP1P01033 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.45■□□□□ 0.7
TIMP1P01033 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.45■□□□□ 0.7
TIMP1P01033 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP1P01033 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.45■□□□□ 0.7
TIMP1P01033 AL031432.2-201ENST00000566714 459 ntBASIC19.45■□□□□ 0.7
TIMP1P01033 AL928711.1-201ENST00000570165 459 ntBASIC19.45■□□□□ 0.7
TIMP1P01033 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.45■□□□□ 0.7
TIMP1P01033 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.45■□□□□ 0.7
TIMP1P01033 AC027612.4-201ENST00000605371 583 ntBASIC19.45■□□□□ 0.7
TIMP1P01033 AC008667.4-201ENST00000607370 168 ntBASIC19.45■□□□□ 0.7
TIMP1P01033 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.45■□□□□ 0.7
TIMP1P01033 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP1P01033 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP1P01033 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP1P01033 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP1P01033 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.45■□□□□ 0.7
TIMP1P01033 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.45■□□□□ 0.7
TIMP1P01033 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP1P01033 AL499627.1-201ENST00000569373 2188 ntBASIC19.44■□□□□ 0.7
TIMP1P01033 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMP1P01033 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMP1P01033 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMP1P01033 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
TIMP1P01033 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.44■□□□□ 0.7
TIMP1P01033 AL020989.1-201ENST00000422979 469 ntBASIC19.44■□□□□ 0.7
TIMP1P01033 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TIMP1P01033 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TIMP1P01033 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.44■□□□□ 0.7
TIMP1P01033 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.44■□□□□ 0.7
TIMP1P01033 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.44■□□□□ 0.7
TIMP1P01033 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.44■□□□□ 0.7
TIMP1P01033 AC239800.4-201ENST00000603712 296 ntBASIC19.44■□□□□ 0.7
TIMP1P01033 AC004790.2-201ENST00000623588 572 ntBASIC19.44■□□□□ 0.7
TIMP1P01033 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMP1P01033 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.44■□□□□ 0.7
TIMP1P01033 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TIMP1P01033 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
TIMP1P01033 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
TIMP1P01033 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMP1P01033 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TIMP1P01033 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.44■□□□□ 0.7
TIMP1P01033 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
TIMP1P01033 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TIMP1P01033 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP1P01033 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TIMP1P01033 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.43■□□□□ 0.7
TIMP1P01033 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.43■□□□□ 0.7
TIMP1P01033 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms