Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.54■□□□□ 0.56
MT-CO1P00395 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-CO1P00395 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-CO1P00395 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-CO1P00395 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
MT-CO1P00395 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-CO1P00395 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-CO1P00395 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.54■□□□□ 0.56
MT-CO1P00395 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-CO1P00395 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-CO1P00395 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-CO1P00395 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MT-CO1P00395 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-CO1P00395 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-CO1P00395 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-CO1P00395 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.53■□□□□ 0.56
MT-CO1P00395 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.53■□□□□ 0.56
MT-CO1P00395 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.53■□□□□ 0.56
MT-CO1P00395 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.53■□□□□ 0.56
MT-CO1P00395 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-CO1P00395 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-CO1P00395 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MT-CO1P00395 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MT-CO1P00395 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-CO1P00395 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.53■□□□□ 0.56
MT-CO1P00395 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MT-CO1P00395 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MT-CO1P00395 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.53■□□□□ 0.56
MT-CO1P00395 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.53■□□□□ 0.56
MT-CO1P00395 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MT-CO1P00395 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.53■□□□□ 0.56
MT-CO1P00395 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.53■□□□□ 0.56
MT-CO1P00395 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.53■□□□□ 0.56
MT-CO1P00395 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.53■□□□□ 0.56
MT-CO1P00395 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.53■□□□□ 0.56
MT-CO1P00395 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MT-CO1P00395 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-CO1P00395 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-CO1P00395 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
MT-CO1P00395 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
MT-CO1P00395 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.53■□□□□ 0.56
MT-CO1P00395 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-CO1P00395 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.53■□□□□ 0.56
MT-CO1P00395 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MT-CO1P00395 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MT-CO1P00395 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
MT-CO1P00395 ESPNP-201ENST00000270691 2015 ntBASIC18.52■□□□□ 0.56
MT-CO1P00395 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.52■□□□□ 0.56
MT-CO1P00395 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
MT-CO1P00395 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MT-CO1P00395 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MT-CO1P00395 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.52■□□□□ 0.56
MT-CO1P00395 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MT-CO1P00395 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MT-CO1P00395 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
MT-CO1P00395 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MT-CO1P00395 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
MT-CO1P00395 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.52■□□□□ 0.56
MT-CO1P00395 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.52■□□□□ 0.56
MT-CO1P00395 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.52■□□□□ 0.56
MT-CO1P00395 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.52■□□□□ 0.56
MT-CO1P00395 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.52■□□□□ 0.56
MT-CO1P00395 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.52■□□□□ 0.56
MT-CO1P00395 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.52■□□□□ 0.56
MT-CO1P00395 AC092329.2-201ENST00000598402 547 ntBASIC18.52■□□□□ 0.56
MT-CO1P00395 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.52■□□□□ 0.56
MT-CO1P00395 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MT-CO1P00395 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MT-CO1P00395 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MT-CO1P00395 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.52■□□□□ 0.56
MT-CO1P00395 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MT-CO1P00395 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
MT-CO1P00395 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MT-CO1P00395 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
MT-CO1P00395 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MT-CO1P00395 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
MT-CO1P00395 AC090164.3-201ENST00000610780 2143 ntBASIC18.52■□□□□ 0.55
MT-CO1P00395 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MT-CO1P00395 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MT-CO1P00395 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO1P00395 KRT18P1-202ENST00000452408 1331 ntBASIC18.51■□□□□ 0.55
MT-CO1P00395 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO1P00395 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO1P00395 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO1P00395 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO1P00395 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO1P00395 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO1P00395 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.51■□□□□ 0.55
MT-CO1P00395 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
MT-CO1P00395 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO1P00395 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.51■□□□□ 0.55
MT-CO1P00395 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.51■□□□□ 0.55
MT-CO1P00395 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.51■□□□□ 0.55
MT-CO1P00395 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.51■□□□□ 0.55
MT-CO1P00395 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
MT-CO1P00395 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
MT-CO1P00395 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO1P00395 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.51■□□□□ 0.55
MT-CO1P00395 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MT-CO1P00395 AL133373.2-201ENST00000623187 2828 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms