Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RFPL1O75677 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFPL1O75677 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFPL1O75677 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RFPL1O75677 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
RFPL1O75677 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.18■□□□□ 0.5
RFPL1O75677 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.18■□□□□ 0.5
RFPL1O75677 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.18■□□□□ 0.5
RFPL1O75677 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.18■□□□□ 0.5
RFPL1O75677 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.18■□□□□ 0.5
RFPL1O75677 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.18■□□□□ 0.5
RFPL1O75677 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RFPL1O75677 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.18■□□□□ 0.5
RFPL1O75677 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFPL1O75677 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFPL1O75677 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFPL1O75677 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.18■□□□□ 0.5
RFPL1O75677 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFPL1O75677 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
RFPL1O75677 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFPL1O75677 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RFPL1O75677 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RFPL1O75677 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFPL1O75677 HOXB1-202ENST00000577092 1414 ntBASIC18.17■□□□□ 0.5
RFPL1O75677 PCDHA12-202ENST00000613593 2588 ntBASIC18.17■□□□□ 0.5
RFPL1O75677 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFPL1O75677 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.17■□□□□ 0.5
RFPL1O75677 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFPL1O75677 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RFPL1O75677 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.17■□□□□ 0.5
RFPL1O75677 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFPL1O75677 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFPL1O75677 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.17■□□□□ 0.5
RFPL1O75677 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.17■□□□□ 0.5
RFPL1O75677 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.17■□□□□ 0.5
RFPL1O75677 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFPL1O75677 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.17■□□□□ 0.5
RFPL1O75677 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFPL1O75677 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFPL1O75677 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RFPL1O75677 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.17■□□□□ 0.5
RFPL1O75677 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFPL1O75677 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFPL1O75677 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.17■□□□□ 0.5
RFPL1O75677 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFPL1O75677 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFPL1O75677 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFPL1O75677 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFPL1O75677 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RFPL1O75677 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFPL1O75677 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.16■□□□□ 0.5
RFPL1O75677 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.16■□□□□ 0.5
RFPL1O75677 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFPL1O75677 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
RFPL1O75677 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFPL1O75677 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFPL1O75677 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RFPL1O75677 AK4P3-201ENST00000418260 669 ntBASIC18.16■□□□□ 0.5
RFPL1O75677 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFPL1O75677 BX664615.1-201ENST00000443558 458 ntBASIC18.16■□□□□ 0.5
RFPL1O75677 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.16■□□□□ 0.5
RFPL1O75677 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFPL1O75677 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
RFPL1O75677 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RFPL1O75677 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFPL1O75677 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFPL1O75677 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFPL1O75677 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.16■□□□□ 0.5
RFPL1O75677 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFPL1O75677 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFPL1O75677 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RFPL1O75677 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.16■□□□□ 0.5
RFPL1O75677 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RFPL1O75677 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFPL1O75677 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFPL1O75677 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.15■□□□□ 0.5
RFPL1O75677 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFPL1O75677 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFPL1O75677 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFPL1O75677 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
RFPL1O75677 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFPL1O75677 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFPL1O75677 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.15■□□□□ 0.5
RFPL1O75677 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.15■□□□□ 0.5
RFPL1O75677 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
RFPL1O75677 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.15■□□□□ 0.5
RFPL1O75677 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
RFPL1O75677 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.15■□□□□ 0.5
RFPL1O75677 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.15■□□□□ 0.5
RFPL1O75677 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFPL1O75677 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFPL1O75677 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFPL1O75677 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFPL1O75677 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFPL1O75677 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFPL1O75677 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFPL1O75677 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFPL1O75677 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.15■□□□□ 0.5
RFPL1O75677 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.15■□□□□ 0.5
RFPL1O75677 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms