Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COCHO43405 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.65■□□□□ 0.58
COCHO43405 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.65■□□□□ 0.58
COCHO43405 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COCHO43405 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.65■□□□□ 0.58
COCHO43405 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COCHO43405 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COCHO43405 INTS4P1-201ENST00000438455 1935 ntBASIC18.65■□□□□ 0.58
COCHO43405 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COCHO43405 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.65■□□□□ 0.58
COCHO43405 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COCHO43405 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
COCHO43405 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.65■□□□□ 0.58
COCHO43405 AP002469.2-201ENST00000531724 424 ntBASIC18.65■□□□□ 0.58
COCHO43405 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COCHO43405 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.65■□□□□ 0.58
COCHO43405 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.65■□□□□ 0.58
COCHO43405 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COCHO43405 AC135776.1-201ENST00000319817 2481 ntBASIC18.65■□□□□ 0.58
COCHO43405 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
COCHO43405 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.65■□□□□ 0.58
COCHO43405 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COCHO43405 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.65■□□□□ 0.58
COCHO43405 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
COCHO43405 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.65■□□□□ 0.58
COCHO43405 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
COCHO43405 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
COCHO43405 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.64■□□□□ 0.58
COCHO43405 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
COCHO43405 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
COCHO43405 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COCHO43405 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COCHO43405 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
COCHO43405 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COCHO43405 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
COCHO43405 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.64■□□□□ 0.57
COCHO43405 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COCHO43405 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.64■□□□□ 0.57
COCHO43405 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.64■□□□□ 0.57
COCHO43405 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.64■□□□□ 0.57
COCHO43405 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.64■□□□□ 0.57
COCHO43405 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COCHO43405 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COCHO43405 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COCHO43405 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COCHO43405 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
COCHO43405 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COCHO43405 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COCHO43405 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
COCHO43405 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
COCHO43405 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COCHO43405 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COCHO43405 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COCHO43405 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
COCHO43405 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COCHO43405 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
COCHO43405 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COCHO43405 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.64■□□□□ 0.57
COCHO43405 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.64■□□□□ 0.57
COCHO43405 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COCHO43405 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COCHO43405 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COCHO43405 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COCHO43405 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COCHO43405 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COCHO43405 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
COCHO43405 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
COCHO43405 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COCHO43405 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COCHO43405 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.63■□□□□ 0.57
COCHO43405 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COCHO43405 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COCHO43405 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COCHO43405 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COCHO43405 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.63■□□□□ 0.57
COCHO43405 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.63■□□□□ 0.57
COCHO43405 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.63■□□□□ 0.57
COCHO43405 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.63■□□□□ 0.57
COCHO43405 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COCHO43405 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COCHO43405 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COCHO43405 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.63■□□□□ 0.57
COCHO43405 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COCHO43405 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
COCHO43405 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.63■□□□□ 0.57
COCHO43405 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COCHO43405 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.63■□□□□ 0.57
COCHO43405 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.63■□□□□ 0.57
COCHO43405 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COCHO43405 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COCHO43405 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COCHO43405 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COCHO43405 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COCHO43405 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COCHO43405 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COCHO43405 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COCHO43405 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COCHO43405 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.62■□□□□ 0.57
COCHO43405 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COCHO43405 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms