Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLOCKO15516 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLOCKO15516 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLOCKO15516 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
CLOCKO15516 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.22■□□□□ 0.35
CLOCKO15516 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLOCKO15516 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CLOCKO15516 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.22■□□□□ 0.35
CLOCKO15516 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLOCKO15516 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.22■□□□□ 0.35
CLOCKO15516 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CLOCKO15516 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.22■□□□□ 0.35
CLOCKO15516 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.22■□□□□ 0.35
CLOCKO15516 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLOCKO15516 MIR4785-201ENST00000585005 73 ntBASIC17.22■□□□□ 0.35
CLOCKO15516 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.22■□□□□ 0.35
CLOCKO15516 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.22■□□□□ 0.35
CLOCKO15516 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.22■□□□□ 0.35
CLOCKO15516 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLOCKO15516 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLOCKO15516 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.22■□□□□ 0.35
CLOCKO15516 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.22■□□□□ 0.35
CLOCKO15516 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.22■□□□□ 0.35
CLOCKO15516 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLOCKO15516 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLOCKO15516 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.22■□□□□ 0.35
CLOCKO15516 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLOCKO15516 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLOCKO15516 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLOCKO15516 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLOCKO15516 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLOCKO15516 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLOCKO15516 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 PP12613-201ENST00000424958 2230 ntBASIC17.21■□□□□ 0.35
CLOCKO15516 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLOCKO15516 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.21■□□□□ 0.35
CLOCKO15516 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 AL096828.2-201ENST00000567259 1965 ntBASIC17.21■□□□□ 0.35
CLOCKO15516 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.21■□□□□ 0.35
CLOCKO15516 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CLOCKO15516 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLOCKO15516 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.21■□□□□ 0.35
CLOCKO15516 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.21■□□□□ 0.35
CLOCKO15516 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.21■□□□□ 0.35
CLOCKO15516 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.21■□□□□ 0.35
CLOCKO15516 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.21■□□□□ 0.35
CLOCKO15516 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.21■□□□□ 0.35
CLOCKO15516 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLOCKO15516 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.21■□□□□ 0.35
CLOCKO15516 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.21■□□□□ 0.35
CLOCKO15516 AC113410.3-201ENST00000623366 203 ntBASIC17.21■□□□□ 0.35
CLOCKO15516 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 OR6D1P-203ENST00000641209 4860 ntBASIC17.21■□□□□ 0.35
CLOCKO15516 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.21■□□□□ 0.35
CLOCKO15516 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.21■□□□□ 0.35
CLOCKO15516 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLOCKO15516 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLOCKO15516 HTR7P1-201ENST00000538670 1336 ntBASIC17.21■□□□□ 0.34
CLOCKO15516 CROCCP1-201ENST00000426910 5675 ntBASIC17.21■□□□□ 0.34
CLOCKO15516 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLOCKO15516 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLOCKO15516 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLOCKO15516 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLOCKO15516 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLOCKO15516 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLOCKO15516 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CLOCKO15516 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CLOCKO15516 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.2■□□□□ 0.34
CLOCKO15516 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CLOCKO15516 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLOCKO15516 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.2■□□□□ 0.34
CLOCKO15516 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLOCKO15516 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLOCKO15516 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLOCKO15516 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLOCKO15516 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.2■□□□□ 0.34
CLOCKO15516 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLOCKO15516 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLOCKO15516 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLOCKO15516 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLOCKO15516 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.2■□□□□ 0.34
CLOCKO15516 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms