Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 AL353692.3-201ENST00000407031 1396 ntBASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 AC092647.4-201ENST00000457211 535 ntBASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 AC005332.3-201ENST00000589904 676 ntBASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 GPR32P1-201ENST00000601788 811 ntBASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCRBV5S1A1TA0A578 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 ZNF444P1-201ENST00000559497 298 ntBASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TCRBV5S1A1TA0A578 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 AL671277.2-201ENST00000458060 996 ntBASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TCRBV5S1A1TA0A578 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TCRBV5S1A1TA0A578 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TCRBV5S1A1TA0A578 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TCRBV5S1A1TA0A578 AC068472.1-201ENST00000474589 881 ntBASIC18.83■□□□□ 0.6
TCRBV5S1A1TA0A578 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.83■□□□□ 0.6
TCRBV5S1A1TA0A578 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.83■□□□□ 0.6
TCRBV5S1A1TA0A578 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.83■□□□□ 0.6
TCRBV5S1A1TA0A578 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.83■□□□□ 0.6
TCRBV5S1A1TA0A578 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TCRBV5S1A1TA0A578 AC009949.1-201ENST00000623048 1830 ntBASIC18.83■□□□□ 0.6
TCRBV5S1A1TA0A578 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TCRBV5S1A1TA0A578 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TCRBV5S1A1TA0A578 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TCRBV5S1A1TA0A578 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.83■□□□□ 0.6
TCRBV5S1A1TA0A578 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.83■□□□□ 0.6
TCRBV5S1A1TA0A578 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TCRBV5S1A1TA0A578 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TCRBV5S1A1TA0A578 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TCRBV5S1A1TA0A578 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms