Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.48■□□□□ 0.87
C11orf42Q8N5U0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.48■□□□□ 0.87
C11orf42Q8N5U0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.47■□□□□ 0.87
C11orf42Q8N5U0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
C11orf42Q8N5U0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
C11orf42Q8N5U0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
C11orf42Q8N5U0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
C11orf42Q8N5U0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
C11orf42Q8N5U0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.47■□□□□ 0.87
C11orf42Q8N5U0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
C11orf42Q8N5U0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
C11orf42Q8N5U0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
C11orf42Q8N5U0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.46■□□□□ 0.87
C11orf42Q8N5U0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
C11orf42Q8N5U0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.46■□□□□ 0.87
C11orf42Q8N5U0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
C11orf42Q8N5U0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
C11orf42Q8N5U0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
C11orf42Q8N5U0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
C11orf42Q8N5U0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
C11orf42Q8N5U0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.45■□□□□ 0.86
C11orf42Q8N5U0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
C11orf42Q8N5U0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
C11orf42Q8N5U0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
C11orf42Q8N5U0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.44■□□□□ 0.86
C11orf42Q8N5U0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
C11orf42Q8N5U0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
C11orf42Q8N5U0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
C11orf42Q8N5U0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.44■□□□□ 0.86
C11orf42Q8N5U0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.44■□□□□ 0.86
C11orf42Q8N5U0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
C11orf42Q8N5U0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
C11orf42Q8N5U0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
C11orf42Q8N5U0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.43■□□□□ 0.86
C11orf42Q8N5U0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
C11orf42Q8N5U0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
C11orf42Q8N5U0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C11orf42Q8N5U0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
C11orf42Q8N5U0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.42■□□□□ 0.86
C11orf42Q8N5U0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C11orf42Q8N5U0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
C11orf42Q8N5U0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C11orf42Q8N5U0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
C11orf42Q8N5U0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C11orf42Q8N5U0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
C11orf42Q8N5U0 WHAMMP3-201ENST00000611636 1609 ntBASIC20.4■□□□□ 0.86
C11orf42Q8N5U0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.4■□□□□ 0.86
C11orf42Q8N5U0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
C11orf42Q8N5U0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
C11orf42Q8N5U0 AL359258.2-201ENST00000564063 1566 ntBASIC20.38■□□□□ 0.85
C11orf42Q8N5U0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
C11orf42Q8N5U0 AC060814.1-201ENST00000554326 538 ntBASIC20.38■□□□□ 0.85
C11orf42Q8N5U0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
C11orf42Q8N5U0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
C11orf42Q8N5U0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
C11orf42Q8N5U0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.37■□□□□ 0.85
C11orf42Q8N5U0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.37■□□□□ 0.85
C11orf42Q8N5U0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
C11orf42Q8N5U0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C11orf42Q8N5U0 AL449106.1-201ENST00000608517 1980 ntBASIC20.37■□□□□ 0.85
C11orf42Q8N5U0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C11orf42Q8N5U0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
C11orf42Q8N5U0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C11orf42Q8N5U0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C11orf42Q8N5U0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
C11orf42Q8N5U0 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.36■□□□□ 0.85
C11orf42Q8N5U0 AC022413.1-201ENST00000624602 984 ntBASIC20.36■□□□□ 0.85
C11orf42Q8N5U0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C11orf42Q8N5U0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.36■□□□□ 0.85
C11orf42Q8N5U0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
C11orf42Q8N5U0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
C11orf42Q8N5U0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
C11orf42Q8N5U0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
C11orf42Q8N5U0 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
C11orf42Q8N5U0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
C11orf42Q8N5U0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.34■□□□□ 0.85
C11orf42Q8N5U0 AC126177.7-201ENST00000547904 679 ntBASIC20.34■□□□□ 0.85
C11orf42Q8N5U0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
C11orf42Q8N5U0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
C11orf42Q8N5U0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
C11orf42Q8N5U0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
C11orf42Q8N5U0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
C11orf42Q8N5U0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
C11orf42Q8N5U0 GPX1-201ENST00000419349 1106 ntBASIC20.33■□□□□ 0.85
C11orf42Q8N5U0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
C11orf42Q8N5U0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.33■□□□□ 0.85
C11orf42Q8N5U0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
C11orf42Q8N5U0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
C11orf42Q8N5U0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.32■□□□□ 0.84
C11orf42Q8N5U0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.32■□□□□ 0.84
C11orf42Q8N5U0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
C11orf42Q8N5U0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
C11orf42Q8N5U0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
C11orf42Q8N5U0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
C11orf42Q8N5U0 AC092296.2-201ENST00000589470 999 ntBASIC20.31■□□□□ 0.84
C11orf42Q8N5U0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.31■□□□□ 0.84
C11orf42Q8N5U0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
C11orf42Q8N5U0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C11orf42Q8N5U0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
C11orf42Q8N5U0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms