Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PGBD3Q8N328 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PGBD3Q8N328 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.17■■□□□ 1.62
PGBD3Q8N328 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.16■■□□□ 1.62
PGBD3Q8N328 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.16■■□□□ 1.62
PGBD3Q8N328 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.16■■□□□ 1.62
PGBD3Q8N328 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.16■■□□□ 1.62
PGBD3Q8N328 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.15■■□□□ 1.62
PGBD3Q8N328 AC026202.3-201ENST00000600805 1127 ntBASIC25.15■■□□□ 1.62
PGBD3Q8N328 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
PGBD3Q8N328 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PGBD3Q8N328 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PGBD3Q8N328 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PGBD3Q8N328 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PGBD3Q8N328 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.14■■□□□ 1.62
PGBD3Q8N328 BHLHE23-202ENST00000612929 1109 ntBASIC25.14■■□□□ 1.62
PGBD3Q8N328 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.61
PGBD3Q8N328 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PGBD3Q8N328 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PGBD3Q8N328 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
PGBD3Q8N328 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.13■■□□□ 1.61
PGBD3Q8N328 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PGBD3Q8N328 AC139426.1-201ENST00000568218 2529 ntBASIC25.13■■□□□ 1.61
PGBD3Q8N328 RP9P-202ENST00000450133 1212 ntBASIC25.13■■□□□ 1.61
PGBD3Q8N328 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.13■■□□□ 1.61
PGBD3Q8N328 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
PGBD3Q8N328 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
PGBD3Q8N328 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
PGBD3Q8N328 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
PGBD3Q8N328 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PGBD3Q8N328 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PGBD3Q8N328 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
PGBD3Q8N328 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
PGBD3Q8N328 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.12■■□□□ 1.61
PGBD3Q8N328 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
PGBD3Q8N328 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.61
PGBD3Q8N328 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.12■■□□□ 1.61
PGBD3Q8N328 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.12■■□□□ 1.61
PGBD3Q8N328 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PGBD3Q8N328 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PGBD3Q8N328 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
PGBD3Q8N328 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.12■■□□□ 1.61
PGBD3Q8N328 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PGBD3Q8N328 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
PGBD3Q8N328 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PGBD3Q8N328 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.1■■□□□ 1.61
PGBD3Q8N328 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.1■■□□□ 1.61
PGBD3Q8N328 AC093536.1-201ENST00000569153 554 ntBASIC25.1■■□□□ 1.61
PGBD3Q8N328 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
PGBD3Q8N328 AL139393.2-201ENST00000608721 2025 ntBASIC25.09■■□□□ 1.61
PGBD3Q8N328 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PGBD3Q8N328 AC025884.2-201ENST00000553429 711 ntBASIC25.09■■□□□ 1.61
PGBD3Q8N328 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
PGBD3Q8N328 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.09■■□□□ 1.61
PGBD3Q8N328 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PGBD3Q8N328 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
PGBD3Q8N328 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
PGBD3Q8N328 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
PGBD3Q8N328 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
PGBD3Q8N328 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.07■■□□□ 1.6
PGBD3Q8N328 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.07■■□□□ 1.6
PGBD3Q8N328 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.07■■□□□ 1.6
PGBD3Q8N328 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PGBD3Q8N328 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
PGBD3Q8N328 DUX4L9-201ENST00000449051 1259 ntBASIC25.06■■□□□ 1.6
PGBD3Q8N328 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PGBD3Q8N328 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
PGBD3Q8N328 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.05■■□□□ 1.6
PGBD3Q8N328 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PGBD3Q8N328 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
PGBD3Q8N328 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.04■■□□□ 1.6
PGBD3Q8N328 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PGBD3Q8N328 MIR3960-201ENST00000583311 91 ntBASIC25.03■■□□□ 1.6
PGBD3Q8N328 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PGBD3Q8N328 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.03■■□□□ 1.6
PGBD3Q8N328 AP002414.2-202ENST00000590929 1450 ntBASIC25.02■■□□□ 1.6
PGBD3Q8N328 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
PGBD3Q8N328 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PGBD3Q8N328 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.01■■□□□ 1.59
PGBD3Q8N328 AC139795.1-202ENST00000500444 432 ntBASIC25.01■■□□□ 1.59
PGBD3Q8N328 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.59
PGBD3Q8N328 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25■■□□□ 1.59
PGBD3Q8N328 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25■■□□□ 1.59
PGBD3Q8N328 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.59
PGBD3Q8N328 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
PGBD3Q8N328 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
PGBD3Q8N328 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
PGBD3Q8N328 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PGBD3Q8N328 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.99■■□□□ 1.59
PGBD3Q8N328 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
PGBD3Q8N328 KRT8P33-201ENST00000508125 1423 ntBASIC24.99■■□□□ 1.59
PGBD3Q8N328 AC010980.1-201ENST00000587192 1142 ntBASIC24.99■■□□□ 1.59
PGBD3Q8N328 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
PGBD3Q8N328 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
PGBD3Q8N328 RAP2CP1-202ENST00000605179 643 ntBASIC24.98■■□□□ 1.59
PGBD3Q8N328 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.98■■□□□ 1.59
PGBD3Q8N328 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.97■■□□□ 1.59
PGBD3Q8N328 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PGBD3Q8N328 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PGBD3Q8N328 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms