Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 YDL057WYDL057W 987 nt7.1□□□□□ -1.27
VPS13Q07878 INH1YDL181W 258 nt7.1□□□□□ -1.27
VPS13Q07878 MHT1YLL062C 975 nt7.1□□□□□ -1.27
VPS13Q07878 HED1YDR014W-A 489 nt7.09□□□□□ -1.27
VPS13Q07878 MRPL23YOR150W 492 nt7.09□□□□□ -1.27
VPS13Q07878 CDC19YAL038W 1503 nt7.09□□□□□ -1.27
VPS13Q07878 HIS2YFR025C 1008 nt7.09□□□□□ -1.27
VPS13Q07878 MTC2YKL098W 1074 nt7.09□□□□□ -1.27
VPS13Q07878 YNL019CYNL019C 855 nt7.08□□□□□ -1.28
VPS13Q07878 YNL033WYNL033W 855 nt7.08□□□□□ -1.28
VPS13Q07878 FTH1YBR207W 1398 nt7.08□□□□□ -1.28
VPS13Q07878 MRP17YKL003C 396 nt7.07□□□□□ -1.28
VPS13Q07878 YDL218WYDL218W 954 nt7.07□□□□□ -1.28
VPS13Q07878 RNH1YMR234W 1047 nt7.07□□□□□ -1.28
VPS13Q07878 SRL2YLR082C 1179 nt7.06□□□□□ -1.28
VPS13Q07878 YLL066CYLL066C 3618 nt7.06□□□□□ -1.28
VPS13Q07878 YLL067CYLL067C 3618 nt7.06□□□□□ -1.28
VPS13Q07878 SFC1YJR095W 969 nt7.06□□□□□ -1.28
VPS13Q07878 CAR2YLR438W 1275 nt7.06□□□□□ -1.28
VPS13Q07878 LEA1YPL213W 717 nt7.06□□□□□ -1.28
VPS13Q07878 QCR6YFR033C 444 nt7.05□□□□□ -1.28
VPS13Q07878 HEM2YGL040C 1029 nt7.05□□□□□ -1.28
VPS13Q07878 AIM33YML087C 939 nt7.05□□□□□ -1.28
VPS13Q07878 HSP26YBR072W 645 nt7.05□□□□□ -1.28
VPS13Q07878 FCP1YMR277W 2199 nt7.04□□□□□ -1.28
VPS13Q07878 YHR213W-BYHR213W-B 300 nt7.03□□□□□ -1.28
VPS13Q07878 YAR064WYAR064W 300 nt7.03□□□□□ -1.28
VPS13Q07878 CCT8YJL008C 1707 nt7.03□□□□□ -1.28
VPS13Q07878 PDC5YLR134W 1692 nt7.03□□□□□ -1.28
VPS13Q07878 RHB1YCR027C 630 nt7.03□□□□□ -1.28
VPS13Q07878 DOT5YIL010W 648 nt7.03□□□□□ -1.28
VPS13Q07878 FRE5YOR384W 2085 nt7.02□□□□□ -1.28
VPS13Q07878 ERG27YLR100W 1044 nt7.02□□□□□ -1.29
VPS13Q07878 SUF3tG(CCC)D 72 nt7.02□□□□□ -1.29
VPS13Q07878 CDA1YLR307W 906 nt7.02□□□□□ -1.29
VPS13Q07878 RVB2YPL235W 1416 nt7.02□□□□□ -1.29
VPS13Q07878 CMP2YML057W 1815 nt7□□□□□ -1.29
VPS13Q07878 BUD32YGR262C 786 nt7□□□□□ -1.29
VPS13Q07878 VMA16YHR026W 642 nt7□□□□□ -1.29
VPS13Q07878 AAT2YLR027C 1257 nt7□□□□□ -1.29
VPS13Q07878 YRB2YIL063C 984 nt7□□□□□ -1.29
VPS13Q07878 SPO7YAL009W 780 nt7□□□□□ -1.29
VPS13Q07878 YHC3YJL059W 1227 nt7□□□□□ -1.29
VPS13Q07878 YAL045CYAL045C 309 nt7□□□□□ -1.29
VPS13Q07878 YBL113CYBL113C 2379 nt7□□□□□ -1.29
VPS13Q07878 YJR154WYJR154W 1041 nt6.99□□□□□ -1.29
VPS13Q07878 YKL018C-AYKL018C-A 300 nt6.99□□□□□ -1.29
VPS13Q07878 ERI1YPL096C-A 207 nt6.99□□□□□ -1.29
VPS13Q07878 CKB1YGL019W 837 nt6.99□□□□□ -1.29
VPS13Q07878 UIP5YKR044W 1332 nt6.98□□□□□ -1.29
VPS13Q07878 YNL140CYNL140C 570 nt6.98□□□□□ -1.29
VPS13Q07878 ADY2YCR010C 852 nt6.98□□□□□ -1.29
VPS13Q07878 RCF2YNR018W 675 nt6.98□□□□□ -1.29
VPS13Q07878 SSO1YPL232W 873 nt6.98□□□□□ -1.29
VPS13Q07878 HPT1YDR399W 666 nt6.97□□□□□ -1.29
VPS13Q07878 RPE1YJL121C 717 nt6.97□□□□□ -1.29
VPS13Q07878 YMR209CYMR209C 1374 nt6.97□□□□□ -1.29
VPS13Q07878 ARP2YDL029W 1176 nt6.97□□□□□ -1.29
VPS13Q07878 PTC7YHR076W 1032 nt6.97□□□□□ -1.29
VPS13Q07878 HNM1YGL077C 1692 nt6.97□□□□□ -1.29
VPS13Q07878 PTC3YBL056W 1407 nt6.97□□□□□ -1.29
VPS13Q07878 NBA1YOL070C 1506 nt6.96□□□□□ -1.29
VPS13Q07878 YNL285WYNL285W 372 nt6.96□□□□□ -1.3
VPS13Q07878 GLC8YMR311C 690 nt6.96□□□□□ -1.3
VPS13Q07878 RPL43AYPR043W 279 nt6.96□□□□□ -1.3
VPS13Q07878 SKS1YPL026C 1509 nt6.96□□□□□ -1.3
VPS13Q07878 TIM22YDL217C 624 nt6.95□□□□□ -1.3
VPS13Q07878 PTC4YBR125C 1182 nt6.94□□□□□ -1.3
VPS13Q07878 LEO1YOR123C 1395 nt6.94□□□□□ -1.3
VPS13Q07878 YGL114WYGL114W 2178 nt6.94□□□□□ -1.3
VPS13Q07878 TCB1YOR086C 3561 nt6.94□□□□□ -1.3
VPS13Q07878 YCR075W-AYCR075W-A 228 nt6.94□□□□□ -1.3
VPS13Q07878 SSP120YLR250W 705 nt6.94□□□□□ -1.3
VPS13Q07878 TPO4YOR273C 1980 nt6.94□□□□□ -1.3
VPS13Q07878 ARE2YNR019W 1929 nt6.93□□□□□ -1.3
VPS13Q07878 UGX2YDL169C 672 nt6.93□□□□□ -1.3
VPS13Q07878 GTS1YGL181W 1191 nt6.92□□□□□ -1.3
VPS13Q07878 RPR2YIR015W 435 nt6.92□□□□□ -1.3
VPS13Q07878 TSR3YOR006C 942 nt6.92□□□□□ -1.3
VPS13Q07878 CDC7YDL017W 1524 nt6.91□□□□□ -1.3
VPS13Q07878 RIM8YGL045W 1629 nt6.91□□□□□ -1.3
VPS13Q07878 ASK1YKL052C 879 nt6.9□□□□□ -1.3
VPS13Q07878 GCV3YAL044C 513 nt6.9□□□□□ -1.3
VPS13Q07878 RPL31BYLR406C 342 nt6.9□□□□□ -1.3
VPS13Q07878 ERG24YNL280C 1317 nt6.9□□□□□ -1.31
VPS13Q07878 RGT2YDL138W 2292 nt6.89□□□□□ -1.31
VPS13Q07878 YDL119CYDL119C 924 nt6.88□□□□□ -1.31
VPS13Q07878 CBR1YIL043C 855 nt6.88□□□□□ -1.31
VPS13Q07878 SWD1YAR003W 1281 nt6.88□□□□□ -1.31
VPS13Q07878 YNL042W-BYNL042W-B 258 nt6.88□□□□□ -1.31
VPS13Q07878 SLA2YNL243W 2907 nt6.88□□□□□ -1.31
VPS13Q07878 tR(ACG)JtR(ACG)J 73 nt6.87□□□□□ -1.31
VPS13Q07878 YML012C-AYML012C-A 378 nt6.87□□□□□ -1.31
VPS13Q07878 YAL056C-AYAL056C-A 351 nt6.87□□□□□ -1.31
VPS13Q07878 MET30YIL046W 1923 nt6.86□□□□□ -1.31
VPS13Q07878 ISN1YOR155C 1353 nt6.86□□□□□ -1.31
VPS13Q07878 PPH22YDL188C 1134 nt6.85□□□□□ -1.31
VPS13Q07878 LIP5YOR196C 1245 nt6.85□□□□□ -1.31
VPS13Q07878 ADE13YLR359W 1449 nt6.85□□□□□ -1.31
VPS13Q07878 THR1YHR025W 1074 nt6.85□□□□□ -1.31
Retrieved 100 of 7,029 protein–RNA pairs in 30.1 ms