Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
HADHAP40939 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
HADHAP40939 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
HADHAP40939 HLA-V-202ENST00000446817 847 ntBASIC24.94■■□□□ 1.58
HADHAP40939 MIR219A2-201ENST00000608502 1504 ntBASIC24.94■■□□□ 1.58
HADHAP40939 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.94■■□□□ 1.58
HADHAP40939 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.93■■□□□ 1.58
HADHAP40939 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
HADHAP40939 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.92■■□□□ 1.58
HADHAP40939 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
HADHAP40939 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.92■■□□□ 1.58
HADHAP40939 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
HADHAP40939 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.92■■□□□ 1.58
HADHAP40939 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HADHAP40939 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.91■■□□□ 1.58
HADHAP40939 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.91■■□□□ 1.58
HADHAP40939 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
HADHAP40939 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.91■■□□□ 1.58
HADHAP40939 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
HADHAP40939 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.91■■□□□ 1.58
HADHAP40939 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HADHAP40939 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
HADHAP40939 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HADHAP40939 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.9■■□□□ 1.58
HADHAP40939 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.9■■□□□ 1.58
HADHAP40939 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.9■■□□□ 1.58
HADHAP40939 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
HADHAP40939 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HADHAP40939 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HADHAP40939 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
HADHAP40939 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
HADHAP40939 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
HADHAP40939 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
HADHAP40939 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.89■■□□□ 1.58
HADHAP40939 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
HADHAP40939 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
HADHAP40939 MIR639-201ENST00000384974 98 ntBASIC24.88■■□□□ 1.57
HADHAP40939 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
HADHAP40939 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
HADHAP40939 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
HADHAP40939 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.88■■□□□ 1.57
HADHAP40939 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
HADHAP40939 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.88■■□□□ 1.57
HADHAP40939 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
HADHAP40939 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
HADHAP40939 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.87■■□□□ 1.57
HADHAP40939 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
HADHAP40939 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
HADHAP40939 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
HADHAP40939 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
HADHAP40939 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
HADHAP40939 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
HADHAP40939 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.87■■□□□ 1.57
HADHAP40939 WHAMMP3-201ENST00000611636 1609 ntBASIC24.86■■□□□ 1.57
HADHAP40939 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.86■■□□□ 1.57
HADHAP40939 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.86■■□□□ 1.57
HADHAP40939 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
HADHAP40939 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
HADHAP40939 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.85■■□□□ 1.57
HADHAP40939 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
HADHAP40939 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
HADHAP40939 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.84■■□□□ 1.57
HADHAP40939 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HADHAP40939 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
HADHAP40939 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.84■■□□□ 1.57
HADHAP40939 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
HADHAP40939 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HADHAP40939 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HADHAP40939 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
HADHAP40939 AC091060.1-201ENST00000623524 1766 ntBASIC24.82■■□□□ 1.56
HADHAP40939 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
HADHAP40939 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.82■■□□□ 1.56
HADHAP40939 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
HADHAP40939 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
HADHAP40939 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
HADHAP40939 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.82■■□□□ 1.56
HADHAP40939 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
HADHAP40939 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.81■■□□□ 1.56
HADHAP40939 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
HADHAP40939 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.81■■□□□ 1.56
HADHAP40939 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
HADHAP40939 AL449106.1-201ENST00000608517 1980 ntBASIC24.81■■□□□ 1.56
HADHAP40939 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
HADHAP40939 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
HADHAP40939 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
HADHAP40939 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.79■■□□□ 1.56
HADHAP40939 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.79■■□□□ 1.56
HADHAP40939 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
HADHAP40939 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.79■■□□□ 1.56
HADHAP40939 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HADHAP40939 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HADHAP40939 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
HADHAP40939 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.78■■□□□ 1.56
HADHAP40939 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HADHAP40939 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HADHAP40939 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HADHAP40939 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
HADHAP40939 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.78■■□□□ 1.56
HADHAP40939 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.77■■□□□ 1.56
HADHAP40939 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms