Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 DUX4L12-201ENST00000614593 1267 ntBASIC23.85■■□□□ 1.41
KRT6AP02538 DUX4L14-201ENST00000621227 1267 ntBASIC23.85■■□□□ 1.41
KRT6AP02538 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KRT6AP02538 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KRT6AP02538 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
KRT6AP02538 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KRT6AP02538 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
KRT6AP02538 AC008813.1-201ENST00000536597 885 ntBASIC23.84■■□□□ 1.41
KRT6AP02538 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KRT6AP02538 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.83■■□□□ 1.41
KRT6AP02538 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
KRT6AP02538 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRT6AP02538 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRT6AP02538 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRT6AP02538 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRT6AP02538 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.82■■□□□ 1.4
KRT6AP02538 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KRT6AP02538 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRT6AP02538 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KRT6AP02538 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
KRT6AP02538 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.81■■□□□ 1.4
KRT6AP02538 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
KRT6AP02538 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.81■■□□□ 1.4
KRT6AP02538 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
KRT6AP02538 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KRT6AP02538 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
KRT6AP02538 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.8■■□□□ 1.4
KRT6AP02538 ZNRF2P2-203ENST00000454624 420 ntBASIC23.8■■□□□ 1.4
KRT6AP02538 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.8■■□□□ 1.4
KRT6AP02538 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.8■■□□□ 1.4
KRT6AP02538 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.8■■□□□ 1.4
KRT6AP02538 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.8■■□□□ 1.4
KRT6AP02538 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KRT6AP02538 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT6AP02538 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT6AP02538 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT6AP02538 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KRT6AP02538 AC145676.1-201ENST00000514988 2004 ntBASIC23.79■■□□□ 1.4
KRT6AP02538 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KRT6AP02538 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRT6AP02538 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KRT6AP02538 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRT6AP02538 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.78■■□□□ 1.4
KRT6AP02538 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
KRT6AP02538 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KRT6AP02538 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
KRT6AP02538 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
KRT6AP02538 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT6AP02538 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
KRT6AP02538 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT6AP02538 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT6AP02538 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.77■■□□□ 1.4
KRT6AP02538 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.39
KRT6AP02538 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KRT6AP02538 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
KRT6AP02538 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
KRT6AP02538 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.76■■□□□ 1.39
KRT6AP02538 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KRT6AP02538 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.76■■□□□ 1.39
KRT6AP02538 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
KRT6AP02538 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KRT6AP02538 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KRT6AP02538 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KRT6AP02538 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.75■■□□□ 1.39
KRT6AP02538 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
KRT6AP02538 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
KRT6AP02538 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KRT6AP02538 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.74■■□□□ 1.39
KRT6AP02538 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.74■■□□□ 1.39
KRT6AP02538 AC148477.6-201ENST00000623746 465 ntBASIC23.74■■□□□ 1.39
KRT6AP02538 AC092803.2-201ENST00000564287 1899 ntBASIC23.74■■□□□ 1.39
KRT6AP02538 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KRT6AP02538 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
KRT6AP02538 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.73■■□□□ 1.39
KRT6AP02538 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
KRT6AP02538 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
KRT6AP02538 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.73■■□□□ 1.39
KRT6AP02538 MIR219A2-201ENST00000608502 1504 ntBASIC23.73■■□□□ 1.39
KRT6AP02538 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
KRT6AP02538 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.72■■□□□ 1.39
KRT6AP02538 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
KRT6AP02538 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.72■■□□□ 1.39
KRT6AP02538 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
KRT6AP02538 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
KRT6AP02538 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
KRT6AP02538 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
KRT6AP02538 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
KRT6AP02538 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
KRT6AP02538 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
KRT6AP02538 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
KRT6AP02538 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.71■■□□□ 1.39
KRT6AP02538 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.71■■□□□ 1.39
KRT6AP02538 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
KRT6AP02538 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
KRT6AP02538 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.7■■□□□ 1.38
KRT6AP02538 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
KRT6AP02538 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
KRT6AP02538 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
KRT6AP02538 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.69■■□□□ 1.38
KRT6AP02538 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms