Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 AC009533.2-201ENST00000543664 586 ntBASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 BX640515.1-201ENST00000617215 977 ntBASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.71■□□□□ 0.43
CSNK1G3Q9Y6M4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CSNK1G3Q9Y6M4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.71■□□□□ 0.42
CSNK1G3Q9Y6M4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CSNK1G3Q9Y6M4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 AC079776.4-201ENST00000511039 504 ntBASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSNK1G3Q9Y6M4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 AC005336.2-201ENST00000593183 939 ntBASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 TP73-AS1-210ENST00000637775 1455 ntBASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSNK1G3Q9Y6M4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms