Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 AL024508.2-201ENST00000607749 1894 ntBASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 AC005332.3-201ENST00000589904 676 ntBASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 AC018470.1-201ENST00000624790 3129 ntBASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL4A3BPQ9Y5P4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 LINC01126-201ENST00000623515 1646 ntBASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 AC092119.3-201ENST00000612618 583 ntBASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.25■□□□□ 0.83
COL4A3BPQ9Y5P4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 AC008687.5-201ENST00000593746 558 ntBASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 AL390719.2-201ENST00000606993 987 ntBASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL4A3BPQ9Y5P4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 IGHGP-201ENST00000390555 1178 ntBASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 CHCHD2P8-201ENST00000429873 447 ntBASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 AP002383.4-201ENST00000442518 975 ntBASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 GPR32P1-201ENST00000601788 811 ntBASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL4A3BPQ9Y5P4 PHGDH-209ENST00000641074 1780 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms