Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 MIR149-201ENST00000384879 89 ntBASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 AC026396.1-201ENST00000419388 421 ntBASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 PVRIG2P-201ENST00000435460 978 ntBASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 RNF126P1-202ENST00000569893 925 ntBASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 MIR3180-4-201ENST00000582223 153 ntBASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 PCDHB18P-201ENST00000524813 2368 ntBASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 AL024508.2-201ENST00000607749 1894 ntBASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HRH3Q9Y5N1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 AL162741.1-201ENST00000565563 1558 ntBASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 LINC01126-201ENST00000623515 1646 ntBASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 AC092329.2-201ENST00000598402 547 ntBASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 AC009102.3-201ENST00000623118 1491 ntBASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.72■□□□□ 0.27
HRH3Q9Y5N1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 TSSC2-201ENST00000450217 709 ntBASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HRH3Q9Y5N1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
HRH3Q9Y5N1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HRH3Q9Y5N1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HRH3Q9Y5N1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
HRH3Q9Y5N1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms