Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 AL671277.2-201ENST00000458060 996 ntBASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 AC113404.2-201ENST00000507884 177 ntBASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHB13Q9Y5F0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 REXO1L9P-201ENST00000604264 2108 ntBASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PCDHB13Q9Y5F0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHB13Q9Y5F0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PCDHB13Q9Y5F0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.02■□□□□ 0.79
PCDHB13Q9Y5F0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 ZNF444P1-201ENST00000559497 298 ntBASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 AL590326.2-201ENST00000625139 305 ntBASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 TMEM14EP-202ENST00000639378 1296 ntBASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHB13Q9Y5F0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PCDHB13Q9Y5F0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PCDHB13Q9Y5F0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB13Q9Y5F0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB13Q9Y5F0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB13Q9Y5F0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20■□□□□ 0.79
PCDHB13Q9Y5F0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB13Q9Y5F0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB13Q9Y5F0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20■□□□□ 0.79
PCDHB13Q9Y5F0 TK1-205ENST00000590862 642 ntTSL 3 BASIC20■□□□□ 0.79
PCDHB13Q9Y5F0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
PCDHB13Q9Y5F0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB13Q9Y5F0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB13Q9Y5F0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
PCDHB13Q9Y5F0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB13Q9Y5F0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB13Q9Y5F0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20■□□□□ 0.79
PCDHB13Q9Y5F0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB13Q9Y5F0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
PCDHB13Q9Y5F0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB13Q9Y5F0 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms