Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
USP25Q9UHP3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
USP25Q9UHP3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.78■□□□□ 0.92
USP25Q9UHP3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 TSPY17P-201ENST00000450329 467 ntBASIC20.78■□□□□ 0.92
USP25Q9UHP3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.78■□□□□ 0.92
USP25Q9UHP3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.78■□□□□ 0.92
USP25Q9UHP3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.78■□□□□ 0.92
USP25Q9UHP3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
USP25Q9UHP3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
USP25Q9UHP3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP25Q9UHP3 KRT8P7-201ENST00000533003 1432 ntBASIC20.78■□□□□ 0.92
USP25Q9UHP3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USP25Q9UHP3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP25Q9UHP3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP25Q9UHP3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP25Q9UHP3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP25Q9UHP3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP25Q9UHP3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.77■□□□□ 0.92
USP25Q9UHP3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP25Q9UHP3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP25Q9UHP3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
USP25Q9UHP3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.77■□□□□ 0.92
USP25Q9UHP3 UNC93B2-201ENST00000285383 730 ntBASIC20.77■□□□□ 0.92
USP25Q9UHP3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.77■□□□□ 0.92
USP25Q9UHP3 MIR718-201ENST00000390190 70 ntBASIC20.77■□□□□ 0.92
USP25Q9UHP3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.77■□□□□ 0.92
USP25Q9UHP3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.77■□□□□ 0.92
USP25Q9UHP3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
USP25Q9UHP3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
USP25Q9UHP3 MIR4674-201ENST00000582457 87 ntBASIC20.77■□□□□ 0.92
USP25Q9UHP3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.77■□□□□ 0.92
USP25Q9UHP3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP25Q9UHP3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
USP25Q9UHP3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USP25Q9UHP3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USP25Q9UHP3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.77■□□□□ 0.92
USP25Q9UHP3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
USP25Q9UHP3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP25Q9UHP3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP25Q9UHP3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.77■□□□□ 0.92
USP25Q9UHP3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
USP25Q9UHP3 HOXB1-202ENST00000577092 1414 ntBASIC20.77■□□□□ 0.91
USP25Q9UHP3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP25Q9UHP3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
USP25Q9UHP3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP25Q9UHP3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP25Q9UHP3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.77■□□□□ 0.91
USP25Q9UHP3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
USP25Q9UHP3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
USP25Q9UHP3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP25Q9UHP3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.76■□□□□ 0.91
USP25Q9UHP3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP25Q9UHP3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP25Q9UHP3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP25Q9UHP3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP25Q9UHP3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP25Q9UHP3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP25Q9UHP3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP25Q9UHP3 BCL2-203ENST00000589955 5011 ntBASIC20.76■□□□□ 0.91
USP25Q9UHP3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP25Q9UHP3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP25Q9UHP3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP25Q9UHP3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
USP25Q9UHP3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
USP25Q9UHP3 AL353719.1-201ENST00000566847 864 ntBASIC20.76■□□□□ 0.91
USP25Q9UHP3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
USP25Q9UHP3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.76■□□□□ 0.91
USP25Q9UHP3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP25Q9UHP3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP25Q9UHP3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.76■□□□□ 0.91
USP25Q9UHP3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
USP25Q9UHP3 AC036111.1-201ENST00000533973 1582 ntBASIC20.76■□□□□ 0.91
USP25Q9UHP3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP25Q9UHP3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP25Q9UHP3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.75■□□□□ 0.91
USP25Q9UHP3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP25Q9UHP3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
USP25Q9UHP3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP25Q9UHP3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
USP25Q9UHP3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP25Q9UHP3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP25Q9UHP3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP25Q9UHP3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms