Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 FAM220CP-201ENST00000395253 831 ntBASIC20.53■□□□□ 0.88
FBXO40Q9UH90 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 FAM215A-202ENST00000632077 792 ntBASIC20.53■□□□□ 0.88
FBXO40Q9UH90 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 AL031598.1-201ENST00000561511 1773 ntBASIC20.53■□□□□ 0.88
FBXO40Q9UH90 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FBXO40Q9UH90 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 AL671883.3-201ENST00000603274 991 ntBASIC20.52■□□□□ 0.88
FBXO40Q9UH90 MIR7706-201ENST00000613747 67 ntBASIC20.52■□□□□ 0.88
FBXO40Q9UH90 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.52■□□□□ 0.88
FBXO40Q9UH90 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FBXO40Q9UH90 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.52■□□□□ 0.87
FBXO40Q9UH90 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
FBXO40Q9UH90 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
FBXO40Q9UH90 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 ESPNP-201ENST00000270691 2015 ntBASIC20.51■□□□□ 0.87
FBXO40Q9UH90 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 AC243591.1-201ENST00000452967 1364 ntBASIC20.51■□□□□ 0.87
FBXO40Q9UH90 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 MIR574-201ENST00000385209 96 ntBASIC20.51■□□□□ 0.87
FBXO40Q9UH90 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 AC132938.6-201ENST00000623828 1655 ntBASIC20.51■□□□□ 0.87
FBXO40Q9UH90 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 AL356309.3-201ENST00000624132 1934 ntBASIC20.51■□□□□ 0.87
FBXO40Q9UH90 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
FBXO40Q9UH90 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.5■□□□□ 0.87
FBXO40Q9UH90 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
FBXO40Q9UH90 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
FBXO40Q9UH90 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
FBXO40Q9UH90 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
FBXO40Q9UH90 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms