Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NCKIPSDQ9NZQ3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKIPSDQ9NZQ3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKIPSDQ9NZQ3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.35■□□□□ 0.53
NCKIPSDQ9NZQ3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKIPSDQ9NZQ3 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.35■□□□□ 0.53
NCKIPSDQ9NZQ3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.35■□□□□ 0.53
NCKIPSDQ9NZQ3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
NCKIPSDQ9NZQ3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NCKIPSDQ9NZQ3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.35■□□□□ 0.53
NCKIPSDQ9NZQ3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.35■□□□□ 0.53
NCKIPSDQ9NZQ3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NCKIPSDQ9NZQ3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.35■□□□□ 0.53
NCKIPSDQ9NZQ3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NCKIPSDQ9NZQ3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.35■□□□□ 0.53
NCKIPSDQ9NZQ3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.35■□□□□ 0.53
NCKIPSDQ9NZQ3 AL357033.4-201ENST00000617703 1807 ntBASIC18.35■□□□□ 0.53
NCKIPSDQ9NZQ3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
NCKIPSDQ9NZQ3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 HBZP1-201ENST00000354915 429 ntBASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 AL645929.1-201ENST00000420084 975 ntBASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 TPM4P1-201ENST00000436100 807 ntBASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 MCCD1P1-208ENST00000445732 328 ntBASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 MIR3180-5-201ENST00000583743 153 ntBASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.34■□□□□ 0.53
NCKIPSDQ9NZQ3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCKIPSDQ9NZQ3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.33■□□□□ 0.53
NCKIPSDQ9NZQ3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
NCKIPSDQ9NZQ3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.33■□□□□ 0.53
NCKIPSDQ9NZQ3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCKIPSDQ9NZQ3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.33■□□□□ 0.53
NCKIPSDQ9NZQ3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NCKIPSDQ9NZQ3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 DUSP5P1-201ENST00000441325 1139 ntBASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.33■□□□□ 0.52
NCKIPSDQ9NZQ3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 GPAT2P1-201ENST00000444924 1672 ntBASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.32■□□□□ 0.52
NCKIPSDQ9NZQ3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms