Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TLR9Q9NR96 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TLR9Q9NR96 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TLR9Q9NR96 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TLR9Q9NR96 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.16■□□□□ 0.66
TLR9Q9NR96 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TLR9Q9NR96 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TLR9Q9NR96 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TLR9Q9NR96 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TLR9Q9NR96 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TLR9Q9NR96 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TLR9Q9NR96 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.16■□□□□ 0.66
TLR9Q9NR96 AC018445.3-201ENST00000624177 1945 ntBASIC19.16■□□□□ 0.66
TLR9Q9NR96 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TLR9Q9NR96 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TLR9Q9NR96 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TLR9Q9NR96 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TLR9Q9NR96 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TLR9Q9NR96 KRT18P3-201ENST00000451602 1288 ntBASIC19.16■□□□□ 0.66
TLR9Q9NR96 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.16■□□□□ 0.66
TLR9Q9NR96 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.16■□□□□ 0.66
TLR9Q9NR96 AC010327.4-202ENST00000591484 748 ntBASIC19.16■□□□□ 0.66
TLR9Q9NR96 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TLR9Q9NR96 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TLR9Q9NR96 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TLR9Q9NR96 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TLR9Q9NR96 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TLR9Q9NR96 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TLR9Q9NR96 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TLR9Q9NR96 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
TLR9Q9NR96 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TLR9Q9NR96 AC116562.4-201ENST00000641316 2276 ntBASIC19.16■□□□□ 0.66
TLR9Q9NR96 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TLR9Q9NR96 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TLR9Q9NR96 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TLR9Q9NR96 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TLR9Q9NR96 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TLR9Q9NR96 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TLR9Q9NR96 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TLR9Q9NR96 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TLR9Q9NR96 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TLR9Q9NR96 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TLR9Q9NR96 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TLR9Q9NR96 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.15■□□□□ 0.66
TLR9Q9NR96 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
TLR9Q9NR96 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.14■□□□□ 0.65
TLR9Q9NR96 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.14■□□□□ 0.65
TLR9Q9NR96 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.14■□□□□ 0.65
TLR9Q9NR96 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TLR9Q9NR96 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TLR9Q9NR96 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.14■□□□□ 0.65
TLR9Q9NR96 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.14■□□□□ 0.65
TLR9Q9NR96 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TLR9Q9NR96 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.14■□□□□ 0.65
TLR9Q9NR96 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TLR9Q9NR96 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.14■□□□□ 0.65
TLR9Q9NR96 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TLR9Q9NR96 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.14■□□□□ 0.65
TLR9Q9NR96 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.14■□□□□ 0.65
TLR9Q9NR96 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TLR9Q9NR96 MTDHP4-201ENST00000600287 670 ntBASIC19.14■□□□□ 0.65
TLR9Q9NR96 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TLR9Q9NR96 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.14■□□□□ 0.65
TLR9Q9NR96 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.14■□□□□ 0.65
TLR9Q9NR96 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TLR9Q9NR96 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.14■□□□□ 0.65
TLR9Q9NR96 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.14■□□□□ 0.65
TLR9Q9NR96 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TLR9Q9NR96 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TLR9Q9NR96 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TLR9Q9NR96 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TLR9Q9NR96 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TLR9Q9NR96 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TLR9Q9NR96 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TLR9Q9NR96 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TLR9Q9NR96 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TLR9Q9NR96 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TLR9Q9NR96 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms