Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 AC034105.1-201ENST00000563488 319 ntBASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PDLIM7Q9NR12 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 TP73-AS1-210ENST00000637775 1455 ntBASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 AC005336.2-201ENST00000593183 939 ntBASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.2■□□□□ 0.82
PDLIM7Q9NR12 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 RPS8P6-201ENST00000426177 609 ntBASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 AL591424.1-201ENST00000442569 1213 ntBASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.19■□□□□ 0.82
PDLIM7Q9NR12 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 YBX2P1-201ENST00000394192 760 ntBASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 AC021087.4-201ENST00000563761 564 ntBASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms