Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRDM9Q9NQV7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 IGHGP-201ENST00000390555 1178 ntBASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 AC005332.3-201ENST00000589904 676 ntBASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 GPR32P1-201ENST00000601788 811 ntBASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 NOC2LP1-202ENST00000452600 2235 ntBASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.11■□□□□ 0.33
PRDM9Q9NQV7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 RNF126P1-202ENST00000569893 925 ntBASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 Z83836.1-201ENST00000624605 1642 ntBASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRDM9Q9NQV7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRDM9Q9NQV7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms