Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC026271.2-201ENST00000428091 497 ntBASIC21.41■■□□□ 1.02
RTN4Q9NQC3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.41■■□□□ 1.02
RTN4Q9NQC3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.41■■□□□ 1.02
RTN4Q9NQC3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTN4Q9NQC3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC21.41■■□□□ 1.02
RTN4Q9NQC3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC21.41■■□□□ 1.02
RTN4Q9NQC3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RTN4Q9NQC3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RTN4Q9NQC3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
RTN4Q9NQC3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
RTN4Q9NQC3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTN4Q9NQC3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTN4Q9NQC3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RTN4Q9NQC3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 GPX1P1-201ENST00000388829 606 ntBASIC21.4■■□□□ 1.02
RTN4Q9NQC3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC21.4■■□□□ 1.02
RTN4Q9NQC3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.39■■□□□ 1.02
RTN4Q9NQC3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC21.39■■□□□ 1.02
RTN4Q9NQC3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
RTN4Q9NQC3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.39■■□□□ 1.02
RTN4Q9NQC3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 AC040160.2-201ENST00000623816 1675 ntBASIC21.39■■□□□ 1.01
RTN4Q9NQC3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RTN4Q9NQC3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 TFP1-202ENST00000475455 1573 ntBASIC21.38■■□□□ 1.01
RTN4Q9NQC3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
RTN4Q9NQC3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms