Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD248Q9HCU0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD248Q9HCU0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD248Q9HCU0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.04■□□□□ 0.64
CD248Q9HCU0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CD248Q9HCU0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD248Q9HCU0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.04■□□□□ 0.64
CD248Q9HCU0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.04■□□□□ 0.64
CD248Q9HCU0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.04■□□□□ 0.64
CD248Q9HCU0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD248Q9HCU0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD248Q9HCU0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
CD248Q9HCU0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD248Q9HCU0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD248Q9HCU0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD248Q9HCU0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.04■□□□□ 0.64
CD248Q9HCU0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.04■□□□□ 0.64
CD248Q9HCU0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.03■□□□□ 0.64
CD248Q9HCU0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 AC036111.1-201ENST00000533973 1582 ntBASIC19.03■□□□□ 0.64
CD248Q9HCU0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CD248Q9HCU0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
CD248Q9HCU0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CD248Q9HCU0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.03■□□□□ 0.64
CD248Q9HCU0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.03■□□□□ 0.64
CD248Q9HCU0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.03■□□□□ 0.64
CD248Q9HCU0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CD248Q9HCU0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.03■□□□□ 0.64
CD248Q9HCU0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.03■□□□□ 0.64
CD248Q9HCU0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.03■□□□□ 0.64
CD248Q9HCU0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD248Q9HCU0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD248Q9HCU0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CD248Q9HCU0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CD248Q9HCU0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.02■□□□□ 0.64
CD248Q9HCU0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.02■□□□□ 0.64
CD248Q9HCU0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.02■□□□□ 0.64
CD248Q9HCU0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD248Q9HCU0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD248Q9HCU0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD248Q9HCU0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD248Q9HCU0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.02■□□□□ 0.64
CD248Q9HCU0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
CD248Q9HCU0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD248Q9HCU0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD248Q9HCU0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD248Q9HCU0 AL450487.1-201ENST00000426799 995 ntBASIC19.02■□□□□ 0.64
CD248Q9HCU0 SEC1P-202ENST00000473944 940 ntBASIC19.02■□□□□ 0.64
CD248Q9HCU0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD248Q9HCU0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.02■□□□□ 0.64
CD248Q9HCU0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD248Q9HCU0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.02■□□□□ 0.64
CD248Q9HCU0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.02■□□□□ 0.64
CD248Q9HCU0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD248Q9HCU0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CD248Q9HCU0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CD248Q9HCU0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CD248Q9HCU0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
CD248Q9HCU0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CD248Q9HCU0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
CD248Q9HCU0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CD248Q9HCU0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD248Q9HCU0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CD248Q9HCU0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD248Q9HCU0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD248Q9HCU0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD248Q9HCU0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD248Q9HCU0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD248Q9HCU0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD248Q9HCU0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CD248Q9HCU0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD248Q9HCU0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD248Q9HCU0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD248Q9HCU0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CD248Q9HCU0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD248Q9HCU0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.01■□□□□ 0.63
CD248Q9HCU0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CD248Q9HCU0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.01■□□□□ 0.63
CD248Q9HCU0 MIR3180-5-201ENST00000583743 153 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms