Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 BCL2-203ENST00000589955 5011 ntBASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
VAT1LQ9HCJ6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 AC090164.3-201ENST00000610780 2143 ntBASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 LINC00167-201ENST00000530583 1419 ntBASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 DUSP5P1-201ENST00000441325 1139 ntBASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 AC011840.4-201ENST00000578471 627 ntBASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 AC233702.3-201ENST00000578656 1387 ntBASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.96■□□□□ 0.95
VAT1LQ9HCJ6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
VAT1LQ9HCJ6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VAT1LQ9HCJ6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.95■□□□□ 0.94
VAT1LQ9HCJ6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
VAT1LQ9HCJ6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VAT1LQ9HCJ6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VAT1LQ9HCJ6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VAT1LQ9HCJ6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VAT1LQ9HCJ6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VAT1LQ9HCJ6 AC068472.1-201ENST00000474589 881 ntBASIC20.95■□□□□ 0.94
VAT1LQ9HCJ6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.95■□□□□ 0.94
VAT1LQ9HCJ6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
VAT1LQ9HCJ6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
VAT1LQ9HCJ6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VAT1LQ9HCJ6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.95■□□□□ 0.94
VAT1LQ9HCJ6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VAT1LQ9HCJ6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.95■□□□□ 0.94
VAT1LQ9HCJ6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
VAT1LQ9HCJ6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 AL845331.1-201ENST00000424978 1190 ntBASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 AC074051.2-201ENST00000565115 352 ntBASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VAT1LQ9HCJ6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms