Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
BCAS3Q9H6U6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
BCAS3Q9H6U6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
BCAS3Q9H6U6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
BCAS3Q9H6U6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
BCAS3Q9H6U6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
BCAS3Q9H6U6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BCAS3Q9H6U6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
BCAS3Q9H6U6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 VENTXP7-201ENST00000475503 772 ntBASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
BCAS3Q9H6U6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
BCAS3Q9H6U6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
BCAS3Q9H6U6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.33■□□□□ 0.84
BCAS3Q9H6U6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
BCAS3Q9H6U6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.33■□□□□ 0.84
BCAS3Q9H6U6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.33■□□□□ 0.84
BCAS3Q9H6U6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
BCAS3Q9H6U6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
BCAS3Q9H6U6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.33■□□□□ 0.84
BCAS3Q9H6U6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 AC135776.1-201ENST00000319817 2481 ntBASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 AP002469.2-201ENST00000531724 424 ntBASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 SLC25A6P4-201ENST00000586535 553 ntBASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 AL121912.1-201ENST00000603683 238 ntBASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 REXO1L6P-202ENST00000619970 1078 ntBASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 AC009154.2-201ENST00000621177 724 ntBASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BCAS3Q9H6U6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 AC007613.1-201ENST00000572811 2597 ntBASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 AC096582.2-201ENST00000510860 516 ntBASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 TP73-AS1-207ENST00000624167 988 ntBASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
BCAS3Q9H6U6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms