Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.79■□□□□ 0.92
RPAP3Q9H6T3 AL031598.1-201ENST00000561511 1773 ntBASIC20.79■□□□□ 0.92
RPAP3Q9H6T3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP3Q9H6T3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP3Q9H6T3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP3Q9H6T3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPAP3Q9H6T3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.78■□□□□ 0.92
RPAP3Q9H6T3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 MIR940-201ENST00000401276 94 ntBASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 AC007967.3-201ENST00000434308 558 ntBASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPAP3Q9H6T3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.77■□□□□ 0.91
RPAP3Q9H6T3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RPAP3Q9H6T3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
RPAP3Q9H6T3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 FAM220CP-201ENST00000395253 831 ntBASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 KRT18P13-201ENST00000400056 1290 ntBASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 AC025062.2-201ENST00000605477 670 ntBASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.76■□□□□ 0.91
RPAP3Q9H6T3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 ZNF259P1-201ENST00000407656 1365 ntBASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 OR7E14P-202ENST00000530490 1290 ntBASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms