Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.35■□□□□ 0.37
PIF1Q9H611 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PIF1Q9H611 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PIF1Q9H611 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PIF1Q9H611 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PIF1Q9H611 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
PIF1Q9H611 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PIF1Q9H611 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.34■□□□□ 0.37
PIF1Q9H611 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
PIF1Q9H611 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PIF1Q9H611 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PIF1Q9H611 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.34■□□□□ 0.37
PIF1Q9H611 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PIF1Q9H611 KRT16P1-201ENST00000399124 1418 ntBASIC17.34■□□□□ 0.37
PIF1Q9H611 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.34■□□□□ 0.37
PIF1Q9H611 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PIF1Q9H611 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.34■□□□□ 0.37
PIF1Q9H611 FAM207BP-201ENST00000447172 505 ntBASIC17.34■□□□□ 0.37
PIF1Q9H611 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.34■□□□□ 0.37
PIF1Q9H611 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PIF1Q9H611 AC011506.1-201ENST00000474329 610 ntBASIC17.34■□□□□ 0.37
PIF1Q9H611 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.34■□□□□ 0.37
PIF1Q9H611 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.34■□□□□ 0.37
PIF1Q9H611 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PIF1Q9H611 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PIF1Q9H611 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.34■□□□□ 0.37
PIF1Q9H611 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PIF1Q9H611 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.34■□□□□ 0.37
PIF1Q9H611 FAM197Y4-202ENST00000622692 608 ntBASIC17.34■□□□□ 0.37
PIF1Q9H611 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PIF1Q9H611 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PIF1Q9H611 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PIF1Q9H611 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PIF1Q9H611 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PIF1Q9H611 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PIF1Q9H611 AC141586.5-201ENST00000624546 2050 ntBASIC17.33■□□□□ 0.37
PIF1Q9H611 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PIF1Q9H611 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PIF1Q9H611 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.33■□□□□ 0.37
PIF1Q9H611 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PIF1Q9H611 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PIF1Q9H611 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
PIF1Q9H611 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PIF1Q9H611 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PIF1Q9H611 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PIF1Q9H611 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
PIF1Q9H611 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PIF1Q9H611 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PIF1Q9H611 KRT18P41-201ENST00000518924 1277 ntBASIC17.33■□□□□ 0.36
PIF1Q9H611 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.33■□□□□ 0.36
PIF1Q9H611 AC130371.2-201ENST00000619443 611 ntBASIC17.33■□□□□ 0.36
PIF1Q9H611 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PIF1Q9H611 AL031985.4-201ENST00000642138 673 ntBASIC17.33■□□□□ 0.36
PIF1Q9H611 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PIF1Q9H611 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PIF1Q9H611 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.33■□□□□ 0.36
PIF1Q9H611 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PIF1Q9H611 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PIF1Q9H611 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PIF1Q9H611 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.32■□□□□ 0.36
PIF1Q9H611 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PIF1Q9H611 MIR564-202ENST00000385049 94 ntBASIC17.32■□□□□ 0.36
PIF1Q9H611 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.32■□□□□ 0.36
PIF1Q9H611 AC098590.1-201ENST00000468126 897 ntBASIC17.32■□□□□ 0.36
PIF1Q9H611 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.32■□□□□ 0.36
PIF1Q9H611 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PIF1Q9H611 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PIF1Q9H611 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.32■□□□□ 0.36
PIF1Q9H611 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.32■□□□□ 0.36
PIF1Q9H611 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
PIF1Q9H611 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.32■□□□□ 0.36
PIF1Q9H611 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PIF1Q9H611 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PIF1Q9H611 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PIF1Q9H611 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PIF1Q9H611 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PIF1Q9H611 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.31■□□□□ 0.36
PIF1Q9H611 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PIF1Q9H611 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PIF1Q9H611 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms