Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 AL160237.2-201ENST00000556165 472 ntBASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 AC074051.2-201ENST00000565115 352 ntBASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 Z69720.1-201ENST00000601483 472 ntBASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RPAP1Q9BWH6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RPAP1Q9BWH6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
RPAP1Q9BWH6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.97■■□□□ 1.11
RPAP1Q9BWH6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RPAP1Q9BWH6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RPAP1Q9BWH6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.97■■□□□ 1.11
RPAP1Q9BWH6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
RPAP1Q9BWH6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RPAP1Q9BWH6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RPAP1Q9BWH6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RPAP1Q9BWH6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RPAP1Q9BWH6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.97■■□□□ 1.11
RPAP1Q9BWH6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.97■■□□□ 1.11
RPAP1Q9BWH6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RPAP1Q9BWH6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.97■■□□□ 1.11
RPAP1Q9BWH6 AP000347.1-202ENST00000435868 847 ntBASIC21.97■■□□□ 1.11
RPAP1Q9BWH6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.97■■□□□ 1.11
RPAP1Q9BWH6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 AC093677.2-201ENST00000600169 1863 ntBASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 AC135776.1-201ENST00000319817 2481 ntBASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 PCDHB18P-201ENST00000524813 2368 ntBASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 IGHV3-47-201ENST00000425060 335 ntBASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 AP002469.2-201ENST00000531724 424 ntBASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 SLC25A6P4-201ENST00000586535 553 ntBASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 AC024563.2-201ENST00000603282 481 ntBASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 AC138894.3-201ENST00000603787 634 ntBASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPAP1Q9BWH6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 LINC00167-201ENST00000530583 1419 ntBASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 ESPNP-201ENST00000270691 2015 ntBASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 RN7SL606P-201ENST00000472779 293 ntBASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPAP1Q9BWH6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPAP1Q9BWH6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
RPAP1Q9BWH6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RPAP1Q9BWH6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPAP1Q9BWH6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPAP1Q9BWH6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.94■■□□□ 1.1
RPAP1Q9BWH6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPAP1Q9BWH6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.94■■□□□ 1.1
RPAP1Q9BWH6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPAP1Q9BWH6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPAP1Q9BWH6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.94■■□□□ 1.1
RPAP1Q9BWH6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms