Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.14■□□□□ 0.33
TUBA1CQ9BQE3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TUBA1CQ9BQE3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1CQ9BQE3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1CQ9BQE3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1CQ9BQE3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TUBA1CQ9BQE3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.14■□□□□ 0.33
TUBA1CQ9BQE3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1CQ9BQE3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBA1CQ9BQE3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
TUBA1CQ9BQE3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 ATP5G1P1-201ENST00000448724 379 ntBASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 PRSS44-201ENST00000515154 1146 ntBASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 AL023803.3-201ENST00000615559 522 ntBASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBA1CQ9BQE3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 HMGA1P5-201ENST00000412453 271 ntBASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 AC007663.1-201ENST00000438948 1240 ntBASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 AC092338.2-201ENST00000568827 1415 ntBASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1CQ9BQE3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 TSPY17P-201ENST00000450329 467 ntBASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 CA15P1-201ENST00000481698 905 ntBASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1CQ9BQE3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA1CQ9BQE3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.1■□□□□ 0.33
TUBA1CQ9BQE3 AL118508.1-201ENST00000613502 2345 ntBASIC17.1■□□□□ 0.33
TUBA1CQ9BQE3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.1■□□□□ 0.33
TUBA1CQ9BQE3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.1■□□□□ 0.33
TUBA1CQ9BQE3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TUBA1CQ9BQE3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TUBA1CQ9BQE3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA1CQ9BQE3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TUBA1CQ9BQE3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA1CQ9BQE3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms