Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.97■□□□□ 0.63
SMOQ99835 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMOQ99835 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMOQ99835 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMOQ99835 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMOQ99835 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
SMOQ99835 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.97■□□□□ 0.63
SMOQ99835 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.97■□□□□ 0.63
SMOQ99835 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.97■□□□□ 0.63
SMOQ99835 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SMOQ99835 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMOQ99835 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMOQ99835 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.96■□□□□ 0.63
SMOQ99835 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMOQ99835 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMOQ99835 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMOQ99835 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMOQ99835 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMOQ99835 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMOQ99835 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SMOQ99835 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMOQ99835 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.96■□□□□ 0.63
SMOQ99835 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.96■□□□□ 0.63
SMOQ99835 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.96■□□□□ 0.63
SMOQ99835 PRELID1P1-202ENST00000567272 903 ntBASIC18.96■□□□□ 0.63
SMOQ99835 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.96■□□□□ 0.63
SMOQ99835 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMOQ99835 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.96■□□□□ 0.63
SMOQ99835 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMOQ99835 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMOQ99835 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMOQ99835 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMOQ99835 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMOQ99835 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMOQ99835 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SMOQ99835 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SMOQ99835 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMOQ99835 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
SMOQ99835 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMOQ99835 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMOQ99835 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMOQ99835 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMOQ99835 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMOQ99835 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
SMOQ99835 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMOQ99835 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SMOQ99835 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.95■□□□□ 0.62
SMOQ99835 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMOQ99835 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMOQ99835 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMOQ99835 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.95■□□□□ 0.62
SMOQ99835 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMOQ99835 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
SMOQ99835 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.95■□□□□ 0.62
SMOQ99835 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMOQ99835 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.95■□□□□ 0.62
SMOQ99835 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.95■□□□□ 0.62
SMOQ99835 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMOQ99835 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.95■□□□□ 0.62
SMOQ99835 KRT126P-201ENST00000549467 1181 ntBASIC18.95■□□□□ 0.62
SMOQ99835 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.95■□□□□ 0.62
SMOQ99835 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SMOQ99835 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.95■□□□□ 0.62
SMOQ99835 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMOQ99835 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMOQ99835 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SMOQ99835 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.95■□□□□ 0.62
SMOQ99835 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMOQ99835 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SMOQ99835 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMOQ99835 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SMOQ99835 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMOQ99835 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
SMOQ99835 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMOQ99835 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMOQ99835 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SMOQ99835 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.94■□□□□ 0.62
SMOQ99835 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMOQ99835 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMOQ99835 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMOQ99835 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMOQ99835 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMOQ99835 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMOQ99835 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
SMOQ99835 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
SMOQ99835 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
SMOQ99835 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.94■□□□□ 0.62
SMOQ99835 FOSL1P1-201ENST00000511041 816 ntBASIC18.94■□□□□ 0.62
SMOQ99835 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMOQ99835 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.94■□□□□ 0.62
SMOQ99835 AC099336.1-202ENST00000602961 463 ntBASIC18.94■□□□□ 0.62
SMOQ99835 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.94■□□□□ 0.62
SMOQ99835 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SMOQ99835 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.94■□□□□ 0.62
SMOQ99835 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMOQ99835 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.94■□□□□ 0.62
SMOQ99835 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.94■□□□□ 0.62
SMOQ99835 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMOQ99835 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMOQ99835 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms