Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 AC117947.1-201ENST00000427448 529 ntBASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 ATP5G1P1-201ENST00000448724 379 ntBASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 AL391807.1-203ENST00000604392 2365 ntBASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHB18PQ96TA0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 YBX1P2-201ENST00000489612 999 ntBASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHB18PQ96TA0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.66
PCDHB18PQ96TA0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 BX664615.1-201ENST00000443558 458 ntBASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 KRT18P57-201ENST00000443599 1254 ntBASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 AC092597.1-201ENST00000487352 616 ntBASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHB18PQ96TA0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 AC034232.1-201ENST00000506026 1064 ntBASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHB18PQ96TA0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms