Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TWNKQ96RR1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TWNKQ96RR1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TWNKQ96RR1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.2■□□□□ 0.66
TWNKQ96RR1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TWNKQ96RR1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TWNKQ96RR1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.2■□□□□ 0.66
TWNKQ96RR1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TWNKQ96RR1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.2■□□□□ 0.66
TWNKQ96RR1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TWNKQ96RR1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TWNKQ96RR1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TWNKQ96RR1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
TWNKQ96RR1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.2■□□□□ 0.66
TWNKQ96RR1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TWNKQ96RR1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TWNKQ96RR1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TWNKQ96RR1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.2■□□□□ 0.66
TWNKQ96RR1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TWNKQ96RR1 KRT18P65-201ENST00000439811 1286 ntBASIC19.2■□□□□ 0.66
TWNKQ96RR1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TWNKQ96RR1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.2■□□□□ 0.66
TWNKQ96RR1 AC068472.1-201ENST00000474589 881 ntBASIC19.2■□□□□ 0.66
TWNKQ96RR1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TWNKQ96RR1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.2■□□□□ 0.66
TWNKQ96RR1 DUTP2-201ENST00000519164 463 ntBASIC19.2■□□□□ 0.66
TWNKQ96RR1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.2■□□□□ 0.66
TWNKQ96RR1 AP002414.4-201ENST00000589764 1148 ntBASIC19.2■□□□□ 0.66
TWNKQ96RR1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.2■□□□□ 0.66
TWNKQ96RR1 AC009154.2-201ENST00000621177 724 ntBASIC19.2■□□□□ 0.66
TWNKQ96RR1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TWNKQ96RR1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TWNKQ96RR1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TWNKQ96RR1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TWNKQ96RR1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TWNKQ96RR1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TWNKQ96RR1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TWNKQ96RR1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.2■□□□□ 0.66
TWNKQ96RR1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TWNKQ96RR1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TWNKQ96RR1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TWNKQ96RR1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.2■□□□□ 0.66
TWNKQ96RR1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TWNKQ96RR1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TWNKQ96RR1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TWNKQ96RR1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 AC100803.2-201ENST00000562459 1963 ntBASIC19.19■□□□□ 0.66
TWNKQ96RR1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TWNKQ96RR1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TWNKQ96RR1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TWNKQ96RR1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 AC091607.1-201ENST00000490318 1060 ntBASIC19.19■□□□□ 0.66
TWNKQ96RR1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 IGHV3-41-201ENST00000613121 348 ntBASIC19.19■□□□□ 0.66
TWNKQ96RR1 AC124864.1-201ENST00000623408 392 ntBASIC19.19■□□□□ 0.66
TWNKQ96RR1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TWNKQ96RR1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TWNKQ96RR1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TWNKQ96RR1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TWNKQ96RR1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
TWNKQ96RR1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TWNKQ96RR1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TWNKQ96RR1 AC138028.4-201ENST00000564984 1845 ntBASIC19.18■□□□□ 0.66
TWNKQ96RR1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TWNKQ96RR1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TWNKQ96RR1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.18■□□□□ 0.66
TWNKQ96RR1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TWNKQ96RR1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TWNKQ96RR1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TWNKQ96RR1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TWNKQ96RR1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TWNKQ96RR1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TWNKQ96RR1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TWNKQ96RR1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.18■□□□□ 0.66
TWNKQ96RR1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TWNKQ96RR1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TWNKQ96RR1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TWNKQ96RR1 ATP5G2P1-201ENST00000433580 426 ntBASIC19.18■□□□□ 0.66
TWNKQ96RR1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms