Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 LINC00265-3P-201ENST00000447588 903 ntBASIC18.69■□□□□ 0.58
PRICKLE1Q96MT3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE1Q96MT3 TOB2P1-201ENST00000469761 992 ntBASIC18.69■□□□□ 0.58
PRICKLE1Q96MT3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.69■□□□□ 0.58
PRICKLE1Q96MT3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.69■□□□□ 0.58
PRICKLE1Q96MT3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE1Q96MT3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.69■□□□□ 0.58
PRICKLE1Q96MT3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE1Q96MT3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.69■□□□□ 0.58
PRICKLE1Q96MT3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PRICKLE1Q96MT3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE1Q96MT3 FZD10-202ENST00000539839 3282 ntBASIC18.69■□□□□ 0.58
PRICKLE1Q96MT3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE1Q96MT3 LINC00602-201ENST00000629776 2065 ntBASIC18.69■□□□□ 0.58
PRICKLE1Q96MT3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE1Q96MT3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRICKLE1Q96MT3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PRICKLE1Q96MT3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 AC091607.1-201ENST00000490318 1060 ntBASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 AC124864.1-201ENST00000623408 392 ntBASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.67■□□□□ 0.58
PRICKLE1Q96MT3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms