Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 AC008608.2-201ENST00000606089 416 ntBASIC21.07■□□□□ 0.96
CCDC17Q96LX7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 AL355877.3-201ENST00000622820 899 ntBASIC21.07■□□□□ 0.96
CCDC17Q96LX7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.07■□□□□ 0.96
CCDC17Q96LX7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC17Q96LX7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 MRPL3P1-201ENST00000400109 1033 ntBASIC21.06■□□□□ 0.96
CCDC17Q96LX7 AC096633.1-201ENST00000422446 749 ntBASIC21.06■□□□□ 0.96
CCDC17Q96LX7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 TP73-AS1-207ENST00000624167 988 ntBASIC21.06■□□□□ 0.96
CCDC17Q96LX7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC17Q96LX7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC17Q96LX7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 FAM220CP-201ENST00000395253 831 ntBASIC21.04■□□□□ 0.96
CCDC17Q96LX7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 ABCD1P5-201ENST00000445663 754 ntBASIC21.04■□□□□ 0.96
CCDC17Q96LX7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 FAM197Y8-203ENST00000450145 560 ntBASIC21.04■□□□□ 0.96
CCDC17Q96LX7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 AP001269.4-201ENST00000609611 512 ntBASIC21.04■□□□□ 0.96
CCDC17Q96LX7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC17Q96LX7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms