Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CALR3Q96L12 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CALR3Q96L12 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CALR3Q96L12 AC022898.2-201ENST00000616822 1312 ntBASIC19.18■□□□□ 0.66
CALR3Q96L12 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CALR3Q96L12 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.18■□□□□ 0.66
CALR3Q96L12 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CALR3Q96L12 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CALR3Q96L12 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CALR3Q96L12 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CALR3Q96L12 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
CALR3Q96L12 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.17■□□□□ 0.66
CALR3Q96L12 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CALR3Q96L12 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.17■□□□□ 0.66
CALR3Q96L12 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CALR3Q96L12 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CALR3Q96L12 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CALR3Q96L12 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CALR3Q96L12 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CALR3Q96L12 AC009053.2-201ENST00000563701 2365 ntBASIC19.17■□□□□ 0.66
CALR3Q96L12 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CALR3Q96L12 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CALR3Q96L12 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.17■□□□□ 0.66
CALR3Q96L12 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.17■□□□□ 0.66
CALR3Q96L12 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.17■□□□□ 0.66
CALR3Q96L12 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CALR3Q96L12 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CALR3Q96L12 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CALR3Q96L12 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CALR3Q96L12 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CALR3Q96L12 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CALR3Q96L12 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.17■□□□□ 0.66
CALR3Q96L12 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CALR3Q96L12 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CALR3Q96L12 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CALR3Q96L12 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.17■□□□□ 0.66
CALR3Q96L12 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CALR3Q96L12 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CALR3Q96L12 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CALR3Q96L12 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CALR3Q96L12 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CALR3Q96L12 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CALR3Q96L12 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
CALR3Q96L12 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CALR3Q96L12 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.17■□□□□ 0.66
CALR3Q96L12 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CALR3Q96L12 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CALR3Q96L12 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALR3Q96L12 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.16■□□□□ 0.66
CALR3Q96L12 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALR3Q96L12 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CALR3Q96L12 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CALR3Q96L12 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALR3Q96L12 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CALR3Q96L12 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CALR3Q96L12 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CALR3Q96L12 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.16■□□□□ 0.66
CALR3Q96L12 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CALR3Q96L12 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.16■□□□□ 0.66
CALR3Q96L12 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CALR3Q96L12 AP003071.4-201ENST00000562276 1284 ntBASIC19.16■□□□□ 0.66
CALR3Q96L12 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.16■□□□□ 0.66
CALR3Q96L12 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALR3Q96L12 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CALR3Q96L12 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CALR3Q96L12 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.16■□□□□ 0.66
CALR3Q96L12 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CALR3Q96L12 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
CALR3Q96L12 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CALR3Q96L12 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALR3Q96L12 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALR3Q96L12 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CALR3Q96L12 AC008894.3-201ENST00000624324 3103 ntBASIC19.16■□□□□ 0.66
CALR3Q96L12 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CALR3Q96L12 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CALR3Q96L12 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CALR3Q96L12 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALR3Q96L12 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALR3Q96L12 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALR3Q96L12 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALR3Q96L12 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALR3Q96L12 AC108860.2-201ENST00000562760 2183 ntBASIC19.15■□□□□ 0.66
CALR3Q96L12 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALR3Q96L12 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALR3Q96L12 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.15■□□□□ 0.66
CALR3Q96L12 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CALR3Q96L12 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALR3Q96L12 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
CALR3Q96L12 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CALR3Q96L12 FITM1-202ENST00000559294 800 ntBASIC19.15■□□□□ 0.66
CALR3Q96L12 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.15■□□□□ 0.66
CALR3Q96L12 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.15■□□□□ 0.66
CALR3Q96L12 AC010240.3-201ENST00000607688 395 ntBASIC19.15■□□□□ 0.66
CALR3Q96L12 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALR3Q96L12 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALR3Q96L12 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALR3Q96L12 TNRC18P3-201ENST00000441896 2691 ntBASIC19.15■□□□□ 0.66
CALR3Q96L12 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALR3Q96L12 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.15■□□□□ 0.66
CALR3Q96L12 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms