Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPTM1LQ96KA5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.42■□□□□ 0.38
CLPTM1LQ96KA5 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLPTM1LQ96KA5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLPTM1LQ96KA5 AL138688.1-201ENST00000624851 1594 ntBASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 SOX15-203ENST00000570788 1093 ntBASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 AC008687.6-201ENST00000596318 630 ntBASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLPTM1LQ96KA5 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CLPTM1LQ96KA5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CLPTM1LQ96KA5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLPTM1LQ96KA5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLPTM1LQ96KA5 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLPTM1LQ96KA5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLPTM1LQ96KA5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLPTM1LQ96KA5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLPTM1LQ96KA5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.39■□□□□ 0.37
CLPTM1LQ96KA5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.39■□□□□ 0.37
CLPTM1LQ96KA5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.39■□□□□ 0.37
CLPTM1LQ96KA5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.39■□□□□ 0.37
CLPTM1LQ96KA5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.39■□□□□ 0.37
CLPTM1LQ96KA5 PRSS44-201ENST00000515154 1146 ntBASIC17.39■□□□□ 0.37
CLPTM1LQ96KA5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLPTM1LQ96KA5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
CLPTM1LQ96KA5 AC092118.2-201ENST00000613495 667 ntBASIC17.39■□□□□ 0.37
CLPTM1LQ96KA5 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLPTM1LQ96KA5 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLPTM1LQ96KA5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLPTM1LQ96KA5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLPTM1LQ96KA5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.39■□□□□ 0.37
CLPTM1LQ96KA5 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms