Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 AC117947.1-201ENST00000427448 529 ntBASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.71■□□□□ 0.42
PDLIM5Q96HC4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 LINC00602-201ENST00000629776 2065 ntBASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 SPDYE15P-201ENST00000424157 909 ntBASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 TSPY5P-201ENST00000426936 936 ntBASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 LINC01023-201ENST00000606054 436 ntBASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM5Q96HC4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 RNF152P1-201ENST00000397754 604 ntBASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 KRT18P65-201ENST00000439811 1286 ntBASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 HOMER2P1-201ENST00000455653 964 ntBASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDLIM5Q96HC4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 LINC00896-202ENST00000609602 2128 ntBASIC17.68■□□□□ 0.42
PDLIM5Q96HC4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms