Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.27■□□□□ 0.52
CHMP6Q96FZ7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP6Q96FZ7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP6Q96FZ7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP6Q96FZ7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.27■□□□□ 0.51
CHMP6Q96FZ7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP6Q96FZ7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP6Q96FZ7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP6Q96FZ7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.27■□□□□ 0.51
CHMP6Q96FZ7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 KRT8P3-201ENST00000519669 1449 ntBASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 ID1-201ENST00000376105 1233 ntBASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 RNA5SP413-201ENST00000516373 109 ntBASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 AC142086.2-201ENST00000569753 217 ntBASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 PCDH8P1-201ENST00000428983 2773 ntBASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CHMP6Q96FZ7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 KRT8P41-201ENST00000533985 1514 ntBASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CHMP6Q96FZ7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms