Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC23.27■■□□□ 1.32
ZNF428Q96B54 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF428Q96B54 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF428Q96B54 TPSP2-201ENST00000561760 610 ntBASIC23.27■■□□□ 1.32
ZNF428Q96B54 GPR32P1-201ENST00000601788 811 ntBASIC23.27■■□□□ 1.32
ZNF428Q96B54 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC23.27■■□□□ 1.32
ZNF428Q96B54 ANKRD20A8P-203ENST00000641373 517 ntBASIC23.27■■□□□ 1.32
ZNF428Q96B54 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF428Q96B54 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
ZNF428Q96B54 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC23.27■■□□□ 1.32
ZNF428Q96B54 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF428Q96B54 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF428Q96B54 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC23.27■■□□□ 1.32
ZNF428Q96B54 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF428Q96B54 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC23.26■■□□□ 1.31
ZNF428Q96B54 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC23.26■■□□□ 1.31
ZNF428Q96B54 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF428Q96B54 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF428Q96B54 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC23.26■■□□□ 1.31
ZNF428Q96B54 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF428Q96B54 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC23.26■■□□□ 1.31
ZNF428Q96B54 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF428Q96B54 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC23.26■■□□□ 1.31
ZNF428Q96B54 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC23.26■■□□□ 1.31
ZNF428Q96B54 TOB2P1-201ENST00000469761 992 ntBASIC23.26■■□□□ 1.31
ZNF428Q96B54 AC091607.1-201ENST00000490318 1060 ntBASIC23.26■■□□□ 1.31
ZNF428Q96B54 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC23.26■■□□□ 1.31
ZNF428Q96B54 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
ZNF428Q96B54 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC23.26■■□□□ 1.31
ZNF428Q96B54 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF428Q96B54 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC23.26■■□□□ 1.31
ZNF428Q96B54 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF428Q96B54 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF428Q96B54 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
ZNF428Q96B54 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF428Q96B54 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF428Q96B54 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF428Q96B54 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC23.26■■□□□ 1.31
ZNF428Q96B54 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZNF428Q96B54 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC23.26■■□□□ 1.31
ZNF428Q96B54 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC23.26■■□□□ 1.31
ZNF428Q96B54 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
ZNF428Q96B54 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
ZNF428Q96B54 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC23.25■■□□□ 1.31
ZNF428Q96B54 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF428Q96B54 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC23.25■■□□□ 1.31
ZNF428Q96B54 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF428Q96B54 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
ZNF428Q96B54 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC23.25■■□□□ 1.31
ZNF428Q96B54 SDHD-206ENST00000528182 754 ntTSL 3 BASIC23.25■■□□□ 1.31
ZNF428Q96B54 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF428Q96B54 MNT-208ENST00000575394 606 ntTSL 4 BASIC23.25■■□□□ 1.31
ZNF428Q96B54 RN7SL510P-201ENST00000581311 263 ntBASIC23.25■■□□□ 1.31
ZNF428Q96B54 AL390719.2-201ENST00000606993 987 ntBASIC23.25■■□□□ 1.31
ZNF428Q96B54 AC009154.2-201ENST00000621177 724 ntBASIC23.25■■□□□ 1.31
ZNF428Q96B54 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF428Q96B54 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF428Q96B54 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC23.25■■□□□ 1.31
ZNF428Q96B54 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF428Q96B54 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
ZNF428Q96B54 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
ZNF428Q96B54 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF428Q96B54 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
ZNF428Q96B54 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF428Q96B54 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZNF428Q96B54 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC23.25■■□□□ 1.31
ZNF428Q96B54 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC23.25■■□□□ 1.31
ZNF428Q96B54 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF428Q96B54 LINC00602-201ENST00000629776 2065 ntBASIC23.24■■□□□ 1.31
ZNF428Q96B54 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF428Q96B54 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC23.24■■□□□ 1.31
ZNF428Q96B54 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF428Q96B54 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC23.24■■□□□ 1.31
ZNF428Q96B54 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC23.24■■□□□ 1.31
ZNF428Q96B54 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF428Q96B54 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
ZNF428Q96B54 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF428Q96B54 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF428Q96B54 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
ZNF428Q96B54 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF428Q96B54 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF428Q96B54 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC23.24■■□□□ 1.31
ZNF428Q96B54 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
ZNF428Q96B54 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF428Q96B54 FOSL1P1-201ENST00000511041 816 ntBASIC23.24■■□□□ 1.31
ZNF428Q96B54 AC004263.2-201ENST00000617183 678 ntBASIC23.24■■□□□ 1.31
ZNF428Q96B54 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
ZNF428Q96B54 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
ZNF428Q96B54 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF428Q96B54 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF428Q96B54 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF428Q96B54 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF428Q96B54 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC23.24■■□□□ 1.31
ZNF428Q96B54 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF428Q96B54 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
ZNF428Q96B54 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
ZNF428Q96B54 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZNF428Q96B54 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZNF428Q96B54 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC23.23■■□□□ 1.31
ZNF428Q96B54 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms