Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A1Q93096 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A1Q93096 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.3■□□□□ 0.2
PTP4A1Q93096 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.3■□□□□ 0.2
PTP4A1Q93096 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A1Q93096 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTP4A1Q93096 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PTP4A1Q93096 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PTP4A1Q93096 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PTP4A1Q93096 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A1Q93096 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
PTP4A1Q93096 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A1Q93096 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A1Q93096 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
PTP4A1Q93096 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
PTP4A1Q93096 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A1Q93096 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.29■□□□□ 0.2
PTP4A1Q93096 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.29■□□□□ 0.2
PTP4A1Q93096 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A1Q93096 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A1Q93096 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A1Q93096 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.29■□□□□ 0.2
PTP4A1Q93096 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PTP4A1Q93096 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A1Q93096 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A1Q93096 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.29■□□□□ 0.2
PTP4A1Q93096 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A1Q93096 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.29■□□□□ 0.2
PTP4A1Q93096 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A1Q93096 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PTP4A1Q93096 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
PTP4A1Q93096 AC009053.2-201ENST00000563701 2365 ntBASIC16.29■□□□□ 0.2
PTP4A1Q93096 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.29■□□□□ 0.2
PTP4A1Q93096 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A1Q93096 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A1Q93096 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A1Q93096 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.29■□□□□ 0.2
PTP4A1Q93096 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.29■□□□□ 0.2
PTP4A1Q93096 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTP4A1Q93096 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PTP4A1Q93096 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A1Q93096 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.28■□□□□ 0.2
PTP4A1Q93096 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.28■□□□□ 0.2
PTP4A1Q93096 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A1Q93096 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A1Q93096 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A1Q93096 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.28■□□□□ 0.2
PTP4A1Q93096 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A1Q93096 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A1Q93096 AP003041.3-201ENST00000527151 707 ntBASIC16.28■□□□□ 0.2
PTP4A1Q93096 FITM1-202ENST00000559294 800 ntBASIC16.28■□□□□ 0.2
PTP4A1Q93096 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.28■□□□□ 0.2
PTP4A1Q93096 AL353719.1-201ENST00000566847 864 ntBASIC16.28■□□□□ 0.2
PTP4A1Q93096 WWOX-216ENST00000569818 525 ntBASIC16.28■□□□□ 0.2
PTP4A1Q93096 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.28■□□□□ 0.2
PTP4A1Q93096 CR769767.2-201ENST00000622735 460 ntBASIC16.28■□□□□ 0.2
PTP4A1Q93096 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PTP4A1Q93096 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A1Q93096 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A1Q93096 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A1Q93096 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A1Q93096 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A1Q93096 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
PTP4A1Q93096 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTP4A1Q93096 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.28■□□□□ 0.2
PTP4A1Q93096 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.28■□□□□ 0.2
PTP4A1Q93096 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A1Q93096 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A1Q93096 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.27■□□□□ 0.2
PTP4A1Q93096 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A1Q93096 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A1Q93096 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.27■□□□□ 0.2
PTP4A1Q93096 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A1Q93096 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A1Q93096 AC138932.1-201ENST00000534164 6830 ntBASIC16.27■□□□□ 0.2
PTP4A1Q93096 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A1Q93096 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A1Q93096 HCG11-201ENST00000411553 5696 ntBASIC16.27■□□□□ 0.2
PTP4A1Q93096 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A1Q93096 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTP4A1Q93096 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PTP4A1Q93096 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.27■□□□□ 0.2
PTP4A1Q93096 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.27■□□□□ 0.2
PTP4A1Q93096 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PTP4A1Q93096 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.27■□□□□ 0.2
PTP4A1Q93096 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.27■□□□□ 0.2
PTP4A1Q93096 AP000525.1-201ENST00000608286 694 ntBASIC16.27■□□□□ 0.2
PTP4A1Q93096 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTP4A1Q93096 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PTP4A1Q93096 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTP4A1Q93096 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.27■□□□□ 0.19
PTP4A1Q93096 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.27■□□□□ 0.19
PTP4A1Q93096 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.27■□□□□ 0.19
PTP4A1Q93096 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.27■□□□□ 0.19
PTP4A1Q93096 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.27■□□□□ 0.19
PTP4A1Q93096 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTP4A1Q93096 AL024508.2-201ENST00000607749 1894 ntBASIC16.27■□□□□ 0.19
PTP4A1Q93096 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PTP4A1Q93096 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
PTP4A1Q93096 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms