Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 TSPY12P-201ENST00000421279 868 ntBASIC20.56■□□□□ 0.88
TNFRSF25Q93038 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 AC011498.5-201ENST00000592027 486 ntBASIC20.56■□□□□ 0.88
TNFRSF25Q93038 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFRSF25Q93038 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 RN7SL606P-201ENST00000472779 293 ntBASIC20.55■□□□□ 0.88
TNFRSF25Q93038 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 AL445228.2-201ENST00000605589 952 ntBASIC20.55■□□□□ 0.88
TNFRSF25Q93038 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNFRSF25Q93038 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 AC012317.2-201ENST00000623305 2251 ntBASIC20.54■□□□□ 0.88
TNFRSF25Q93038 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 AL845331.1-201ENST00000424978 1190 ntBASIC20.54■□□□□ 0.88
TNFRSF25Q93038 TSPY22P-201ENST00000427496 604 ntBASIC20.54■□□□□ 0.88
TNFRSF25Q93038 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 AC010331.1-201ENST00000611423 582 ntBASIC20.54■□□□□ 0.88
TNFRSF25Q93038 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TNFRSF25Q93038 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 AC134043.2-201ENST00000624206 2238 ntBASIC20.53■□□□□ 0.88
TNFRSF25Q93038 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 AC112698.1-201ENST00000510299 916 ntBASIC20.53■□□□□ 0.88
TNFRSF25Q93038 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms