Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RPGRQ92834 HS6ST1P1-201ENST00000481504 1234 ntBASIC22.26■■□□□ 1.15
RPGRQ92834 UNC93B6-202ENST00000528242 690 ntBASIC22.26■■□□□ 1.15
RPGRQ92834 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC22.26■■□□□ 1.15
RPGRQ92834 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC22.26■■□□□ 1.15
RPGRQ92834 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC22.26■■□□□ 1.15
RPGRQ92834 AP000867.4-201ENST00000641616 219 ntBASIC22.26■■□□□ 1.15
RPGRQ92834 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RPGRQ92834 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RPGRQ92834 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC22.25■■□□□ 1.15
RPGRQ92834 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPGRQ92834 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.25■■□□□ 1.15
RPGRQ92834 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC22.25■■□□□ 1.15
RPGRQ92834 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPGRQ92834 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPGRQ92834 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
RPGRQ92834 IMP4-203ENST00000409935 958 ntTSL 5 BASIC22.25■■□□□ 1.15
RPGRQ92834 LAGE3P1-201ENST00000425356 484 ntBASIC22.25■■□□□ 1.15
RPGRQ92834 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
RPGRQ92834 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.25■■□□□ 1.15
RPGRQ92834 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPGRQ92834 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RPGRQ92834 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
RPGRQ92834 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RPGRQ92834 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.24■■□□□ 1.15
RPGRQ92834 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RPGRQ92834 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.24■■□□□ 1.15
RPGRQ92834 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.24■■□□□ 1.15
RPGRQ92834 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPGRQ92834 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPGRQ92834 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC22.24■■□□□ 1.15
RPGRQ92834 RPSAP43-201ENST00000402237 625 ntBASIC22.24■■□□□ 1.15
RPGRQ92834 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC22.24■■□□□ 1.15
RPGRQ92834 GPX1P2-201ENST00000429271 606 ntBASIC22.24■■□□□ 1.15
RPGRQ92834 AC007967.3-201ENST00000434308 558 ntBASIC22.24■■□□□ 1.15
RPGRQ92834 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC22.24■■□□□ 1.15
RPGRQ92834 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC22.24■■□□□ 1.15
RPGRQ92834 RNA5SP416-201ENST00000516838 111 ntBASIC22.24■■□□□ 1.15
RPGRQ92834 AC040169.1-201ENST00000565382 521 ntBASIC22.24■■□□□ 1.15
RPGRQ92834 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RPGRQ92834 TBC1D3P5-201ENST00000579401 1545 ntBASIC22.24■■□□□ 1.15
RPGRQ92834 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
RPGRQ92834 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RPGRQ92834 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RPGRQ92834 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPGRQ92834 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RPGRQ92834 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RPGRQ92834 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RPGRQ92834 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.23■■□□□ 1.15
RPGRQ92834 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RPGRQ92834 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RPGRQ92834 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC22.23■■□□□ 1.15
RPGRQ92834 BX005266.1-201ENST00000473402 457 ntBASIC22.23■■□□□ 1.15
RPGRQ92834 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RPGRQ92834 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC22.23■■□□□ 1.15
RPGRQ92834 RPS29-206ENST00000557111 488 ntTSL 2 BASIC22.23■■□□□ 1.15
RPGRQ92834 MIR3687-2-201ENST00000577708 61 ntBASIC22.23■■□□□ 1.15
RPGRQ92834 MIR3687-1-201ENST00000614492 61 ntBASIC22.23■■□□□ 1.15
RPGRQ92834 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RPGRQ92834 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC22.23■■□□□ 1.15
RPGRQ92834 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
RPGRQ92834 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
RPGRQ92834 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RPGRQ92834 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RPGRQ92834 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RPGRQ92834 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
RPGRQ92834 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC22.22■■□□□ 1.15
RPGRQ92834 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RPGRQ92834 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RPGRQ92834 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RPGRQ92834 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RPGRQ92834 YBX2P1-201ENST00000394192 760 ntBASIC22.22■■□□□ 1.15
RPGRQ92834 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RPGRQ92834 AC007967.2-201ENST00000432613 625 ntBASIC22.22■■□□□ 1.15
RPGRQ92834 DNAJB3-201ENST00000446806 729 ntBASIC22.22■■□□□ 1.15
RPGRQ92834 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.22■■□□□ 1.15
RPGRQ92834 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RPGRQ92834 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.22■■□□□ 1.15
RPGRQ92834 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.22■■□□□ 1.15
RPGRQ92834 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RPGRQ92834 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RPGRQ92834 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.21■■□□□ 1.15
RPGRQ92834 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPGRQ92834 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC22.21■■□□□ 1.15
RPGRQ92834 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPGRQ92834 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPGRQ92834 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPGRQ92834 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPGRQ92834 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RPGRQ92834 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPGRQ92834 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
RPGRQ92834 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RPGRQ92834 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPGRQ92834 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPGRQ92834 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
RPGRQ92834 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RPGRQ92834 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
RPGRQ92834 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.21■■□□□ 1.15
RPGRQ92834 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC22.21■■□□□ 1.15
RPGRQ92834 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms