Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.23□□□□□ -0.13
MBD3L1Q8WWY6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MBD3L1Q8WWY6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 AL109659.2-201ENST00000606809 1674 ntBASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 C1QL1P1-201ENST00000568105 661 ntBASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.21□□□□□ -0.13
MBD3L1Q8WWY6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MBD3L1Q8WWY6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MBD3L1Q8WWY6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
MBD3L1Q8WWY6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MBD3L1Q8WWY6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.14
MBD3L1Q8WWY6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MBD3L1Q8WWY6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms