Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 AC148477.8-201ENST00000624298 468 ntBASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 BX323043.1-201ENST00000641006 1765 ntBASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 RNA5SP419-201ENST00000515908 135 ntBASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 AL662844.1-201ENST00000546340 181 ntBASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 TNXA-203ENST00000507684 2038 ntBASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SH3RF3Q8TEJ3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 AL355877.3-201ENST00000622820 899 ntBASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.43■■□□□ 1.02
SH3RF3Q8TEJ3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 FGFR3P6-201ENST00000457012 610 ntBASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SH3RF3Q8TEJ3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms