Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 ESRRAP1-201ENST00000400596 1257 ntBASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 AC018695.7-201ENST00000624587 2492 ntBASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RFWD2Q8NHY2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 AL118508.1-201ENST00000613502 2345 ntBASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RFWD2Q8NHY2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 AL355312.1-201ENST00000407115 2176 ntBASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 MIR4651-201ENST00000582622 73 ntBASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RFWD2Q8NHY2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFWD2Q8NHY2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RFWD2Q8NHY2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.91■□□□□ 0.46
RFWD2Q8NHY2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RFWD2Q8NHY2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFWD2Q8NHY2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.91■□□□□ 0.46
RFWD2Q8NHY2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFWD2Q8NHY2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFWD2Q8NHY2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFWD2Q8NHY2 AL109659.2-201ENST00000606809 1674 ntBASIC17.91■□□□□ 0.46
RFWD2Q8NHY2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms