Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.45■□□□□ 0.7
BEST2Q8NFU1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.45■□□□□ 0.7
BEST2Q8NFU1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BEST2Q8NFU1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BEST2Q8NFU1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.45■□□□□ 0.7
BEST2Q8NFU1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
BEST2Q8NFU1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BEST2Q8NFU1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BEST2Q8NFU1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
BEST2Q8NFU1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BEST2Q8NFU1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 AC132938.6-201ENST00000623828 1655 ntBASIC19.44■□□□□ 0.7
BEST2Q8NFU1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 AL691432.3-201ENST00000621860 400 ntBASIC19.44■□□□□ 0.7
BEST2Q8NFU1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.44■□□□□ 0.7
BEST2Q8NFU1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 AC093677.2-201ENST00000600169 1863 ntBASIC19.43■□□□□ 0.7
BEST2Q8NFU1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 TPM4P1-201ENST00000436100 807 ntBASIC19.43■□□□□ 0.7
BEST2Q8NFU1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 AC091607.1-201ENST00000490318 1060 ntBASIC19.43■□□□□ 0.7
BEST2Q8NFU1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 AP005901.3-202ENST00000581653 237 ntBASIC19.43■□□□□ 0.7
BEST2Q8NFU1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
BEST2Q8NFU1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 IGHV3-47-201ENST00000425060 335 ntBASIC19.42■□□□□ 0.7
BEST2Q8NFU1 MINOS1P3-201ENST00000457048 203 ntBASIC19.42■□□□□ 0.7
BEST2Q8NFU1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 AC099336.1-202ENST00000602961 463 ntBASIC19.42■□□□□ 0.7
BEST2Q8NFU1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BEST2Q8NFU1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms