Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.24■■□□□ 1.15
RTL9Q8NET4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
RTL9Q8NET4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC22.24■■□□□ 1.15
RTL9Q8NET4 AC096633.1-201ENST00000422446 749 ntBASIC22.24■■□□□ 1.15
RTL9Q8NET4 SCARNA2-201ENST00000458748 420 ntBASIC22.24■■□□□ 1.15
RTL9Q8NET4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC22.24■■□□□ 1.15
RTL9Q8NET4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC22.24■■□□□ 1.15
RTL9Q8NET4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC22.24■■□□□ 1.15
RTL9Q8NET4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RTL9Q8NET4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTL9Q8NET4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
RTL9Q8NET4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTL9Q8NET4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTL9Q8NET4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RTL9Q8NET4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTL9Q8NET4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTL9Q8NET4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTL9Q8NET4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTL9Q8NET4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.23■■□□□ 1.15
RTL9Q8NET4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTL9Q8NET4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RTL9Q8NET4 HIST2H3DP1-201ENST00000401004 416 ntBASIC22.23■■□□□ 1.15
RTL9Q8NET4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.23■■□□□ 1.15
RTL9Q8NET4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC22.23■■□□□ 1.15
RTL9Q8NET4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC22.23■■□□□ 1.15
RTL9Q8NET4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RTL9Q8NET4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC22.23■■□□□ 1.15
RTL9Q8NET4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
RTL9Q8NET4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.22■■□□□ 1.15
RTL9Q8NET4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RTL9Q8NET4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RTL9Q8NET4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTL9Q8NET4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC22.22■■□□□ 1.15
RTL9Q8NET4 KRT8P47-201ENST00000604727 1398 ntBASIC22.22■■□□□ 1.15
RTL9Q8NET4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC22.22■■□□□ 1.15
RTL9Q8NET4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC22.22■■□□□ 1.15
RTL9Q8NET4 AC007967.3-201ENST00000434308 558 ntBASIC22.22■■□□□ 1.15
RTL9Q8NET4 DUTP2-201ENST00000519164 463 ntBASIC22.22■■□□□ 1.15
RTL9Q8NET4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RTL9Q8NET4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC22.22■■□□□ 1.15
RTL9Q8NET4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTL9Q8NET4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC22.22■■□□□ 1.15
RTL9Q8NET4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC22.22■■□□□ 1.15
RTL9Q8NET4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTL9Q8NET4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RTL9Q8NET4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RTL9Q8NET4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC22.22■■□□□ 1.15
RTL9Q8NET4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RTL9Q8NET4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RTL9Q8NET4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
RTL9Q8NET4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
RTL9Q8NET4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTL9Q8NET4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTL9Q8NET4 PHGDH-209ENST00000641074 1780 ntBASIC22.21■■□□□ 1.15
RTL9Q8NET4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
RTL9Q8NET4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC22.21■■□□□ 1.15
RTL9Q8NET4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTL9Q8NET4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RTL9Q8NET4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RTL9Q8NET4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTL9Q8NET4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTL9Q8NET4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC22.21■■□□□ 1.15
RTL9Q8NET4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC22.21■■□□□ 1.15
RTL9Q8NET4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC22.21■■□□□ 1.15
RTL9Q8NET4 RNPS1P1-201ENST00000507437 918 ntBASIC22.21■■□□□ 1.15
RTL9Q8NET4 AC073648.2-201ENST00000510116 352 ntBASIC22.21■■□□□ 1.15
RTL9Q8NET4 POLD2P1-201ENST00000511220 997 ntBASIC22.21■■□□□ 1.15
RTL9Q8NET4 KRT18P58-201ENST00000527480 1120 ntBASIC22.21■■□□□ 1.15
RTL9Q8NET4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RTL9Q8NET4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC22.21■■□□□ 1.15
RTL9Q8NET4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC22.21■■□□□ 1.15
RTL9Q8NET4 AC106730.1-201ENST00000566722 1090 ntBASIC22.21■■□□□ 1.15
RTL9Q8NET4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC22.21■■□□□ 1.15
RTL9Q8NET4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
RTL9Q8NET4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC22.2■■□□□ 1.15
RTL9Q8NET4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC22.2■■□□□ 1.14
RTL9Q8NET4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RTL9Q8NET4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RTL9Q8NET4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RTL9Q8NET4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
RTL9Q8NET4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RTL9Q8NET4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC22.2■■□□□ 1.14
RTL9Q8NET4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC22.2■■□□□ 1.14
RTL9Q8NET4 FAM220CP-201ENST00000395253 831 ntBASIC22.2■■□□□ 1.14
RTL9Q8NET4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
RTL9Q8NET4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC22.2■■□□□ 1.14
RTL9Q8NET4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC22.2■■□□□ 1.14
RTL9Q8NET4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC22.2■■□□□ 1.14
RTL9Q8NET4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC22.2■■□□□ 1.14
RTL9Q8NET4 FAM215A-202ENST00000632077 792 ntBASIC22.2■■□□□ 1.14
RTL9Q8NET4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC22.2■■□□□ 1.14
RTL9Q8NET4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RTL9Q8NET4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC22.2■■□□□ 1.14
RTL9Q8NET4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RTL9Q8NET4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RTL9Q8NET4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RTL9Q8NET4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC22.19■■□□□ 1.14
RTL9Q8NET4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RTL9Q8NET4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RTL9Q8NET4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms