Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 AC079602.3-201ENST00000623931 403 ntBASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 HBZP1-201ENST00000354915 429 ntBASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 FLJ13224-201ENST00000313737 1514 ntBASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRFBP1Q8NEF9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 ZNF444P1-201ENST00000559497 298 ntBASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 LINC01311-201ENST00000565162 1445 ntBASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRFBP1Q8NEF9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 REXO1L9P-201ENST00000604264 2108 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms