Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF248Q8NDW4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 FAM215A-202ENST00000632077 792 ntBASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 AC006333.2-201ENST00000607957 2099 ntBASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF248Q8NDW4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 AL049840.3-201ENST00000602669 611 ntBASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 AL355877.3-201ENST00000622820 899 ntBASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 AC141586.3-201ENST00000562166 1838 ntBASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF248Q8NDW4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 RBM17P3-201ENST00000417687 1192 ntBASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 HMGN1P19-201ENST00000436976 333 ntBASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 AL139424.1-201ENST00000607572 797 ntBASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF248Q8NDW4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms